| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3465 |
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| Symbol | |
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| ID | 5200064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3802991 |
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| End bp | 3804193 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640583014 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001263949 |
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| Protein GI | 148556367 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00125777 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACACGGG TTGGAAGGAG CCCCTGGTTG AAGCTTTTGC GTGCCCTCAT CCGCGGTCGC
CGTCGCGTGG TCCGGCCCGG CAGGGAGCGC TTGCCCGAAG GCACCTATAT CGAACTCGTC
CAGTCGCTGT TCGGTTACAC CTTCCCGGCG ATGATCATGA CGCTGTGCTT CGCGGGCACC
GGCGCCTATC TGACGGCGCG CACCGACGAC CCGCTGATGC TGCTGTTCTA CGGCCTCGGG
CTGATCGCCT CGGCGATCCG CCTGTTCGTC CTGTTCGGGC TCCGTCGCAA GGCGCTGGCG
CCCGGGATCG GCCTCCACGT CGCCCGCTCG ATCGAGCGCA GCTTCGGCCT CGCCTATGTC
GGCTTCGCGG CGGCCTTCGG CGCCTTCGCG GCGCGGGCCT ATGGGATCAT CGACCCGGAC
CTGCACGTGC CCCTGGTCGC GCTGGTCTAC GGCTATGGCG CCGGGGTGGC GGCGACGGTG
GCGCTGCGCC TGTGGGTCAG CGTCCCGGCG GTGGTGATCG CGACCGTGCC GATGATCTTC
GTCGCGCTGC TGATGCCGGG GGAGGCGCAT TGGGCGGCGG CGCTGCTCAC CACGCTGTTC
CTGGCCGGCG GCGTCCTGTC GATGATCCAG CGCTATCATG AGACCGCCGC GCAGATATCG
ATGCGCCGGC TGATGGAGAC GCTGGCGCGG CAGGATGATC TGACCGGCCT GCCCAACCGC
CTCGTCCTGC GCGAGCGGTT CGAGCGGCTG ATCGCCCGCG CCGACGAATC GGAGCTGATC
GCGGTCCATT GCCTCGACAT CAACCAGCTC GAACCGGTCA ACGAGATGTA CGGCCACATG
GCAGGCGACG CGCTGCTCAA GGCGGTCTCG CAGCGCCTGC GCCGGGTGGT GAAGGGCGAC
AACCTCGTCA TCCATCTCAA CGGCGACGAT TTCGTCGTCA TCCAGCCCGG CATGACCGAC
GCGGCCGAGG CGCAGGGACT GGCGCACCAG ATCGTCGCCA CGCTCGACAA GAGCTATGCG
GTGGCGGGCG AGGACATCAT CATCACCGCC AATATCGGCT ATGCCATCGA CCTGCAGCAT
GGCGCCGACC TCGAACGGCT GCTGCTCGGC GCCGAACGCG CCCTGACCGG CAGCAAGCGC
GCCGCCACCG GCGTCGCCGC CTATGACGGC ACACGCTGGG GCGGAGAGAC GGGCGCTGGC
TGA
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| Protein sequence | MTRVGRSPWL KLLRALIRGR RRVVRPGRER LPEGTYIELV QSLFGYTFPA MIMTLCFAGT
GAYLTARTDD PLMLLFYGLG LIASAIRLFV LFGLRRKALA PGIGLHVARS IERSFGLAYV
GFAAAFGAFA ARAYGIIDPD LHVPLVALVY GYGAGVAATV ALRLWVSVPA VVIATVPMIF
VALLMPGEAH WAAALLTTLF LAGGVLSMIQ RYHETAAQIS MRRLMETLAR QDDLTGLPNR
LVLRERFERL IARADESELI AVHCLDINQL EPVNEMYGHM AGDALLKAVS QRLRRVVKGD
NLVIHLNGDD FVVIQPGMTD AAEAQGLAHQ IVATLDKSYA VAGEDIIITA NIGYAIDLQH
GADLERLLLG AERALTGSKR AATGVAAYDG TRWGGETGAG
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