| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3442 |
|---|
| Symbol | |
|---|
| ID | 5198691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3777896 |
|---|
| End bp | 3778732 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 640582990 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263926 |
|---|
| Protein GI | 148556344 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2607] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.21771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.401797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACC CCGCCATCCT CGCCCGCATC GCCGACGCCC TCGAGCGGAT CGCGCCGCCG
CCCGCGCCGC ATGCCGATCC GGCGGCGCAT CCCGCCTATG TCTGGCGCGA CCATGGCCTC
GCCGTGGCCC GCGTCTTTTC GCCGCTGCCG CTCGACCTGC TGACCGGGGT CGACACGCAG
AAGGCGGCGC TGCTCGACAA TGCCCGGCGG CTGGCGACCG GCGCCGCCGC GCACGACGTG
CTGCTGTGGG GCGCGCGCGG CGCGGGCAAG TCGGCGCTGG TCAAGGCGAC CGTCGGCGAG
CTGCGCGGGC AGGGCCATGA CGTCGCGCTG ATCGAGATCG CCGGCGAGCG GATCGAGGAG
CTGCCGCGCC TGTTCGCGCT GATCGCCGAC GTGCCGCGCG CCTTCGTCCT GTTCCTCGAC
GATCTCGGCT TTGACGAAGG CGCTTCCGGG GCCGCGGGCG GACAGGGCCC GCGCCTGCTG
CGCTCGATGC TCGAAGGCGG GGCCGAGGCG CGGCCGGCCA ATGCCCGGCT CCACGTCACC
GCCAACCGCC GCCACATCGT CTCGCGCGAC CTGCGCGAGC AGGACAGCCC GATCAACCCG
CGCGACGTGG TCGACGACAA GCTCGCGCTC GCCGACCGCT TCGGCCTGTC GCTCGGCTTC
CACGTCTGCG ACCAGGACAC CTATGTCGCG ATGGTGCAGG GCTATGCCGA CCGCTACGGC
CTCGCCTTCG AACCGCTCGA CGCGATCGCC TGGGCCACCC AGCGCGGCAG CCGCTCGGGC
CGCGTCGCCT GGCAATATGT CGTCGAACTG GCGGGGCGGG CTGGTAAGAA GCTCTAA
|
|---|
| Protein sequence | MTDPAILARI ADALERIAPP PAPHADPAAH PAYVWRDHGL AVARVFSPLP LDLLTGVDTQ
KAALLDNARR LATGAAAHDV LLWGARGAGK SALVKATVGE LRGQGHDVAL IEIAGERIEE
LPRLFALIAD VPRAFVLFLD DLGFDEGASG AAGGQGPRLL RSMLEGGAEA RPANARLHVT
ANRRHIVSRD LREQDSPINP RDVVDDKLAL ADRFGLSLGF HVCDQDTYVA MVQGYADRYG
LAFEPLDAIA WATQRGSRSG RVAWQYVVEL AGRAGKKL
|
|---|
| |