| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3441 |
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| Symbol | |
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| ID | 5198690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3776433 |
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| End bp | 3777788 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582989 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_001263925 |
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| Protein GI | 148556343 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.260791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.434285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG CCAAGCCCCG CCTGCTGATC GTCGAGGACG ACGAGGGGCT GCAGAAGCAG
CTCCGCTGGG CCTATGAGGA TTATGAGGTG GTCTCCGCCA CCAACCGCCA GGCGGCGATC
GACGCGCTGC GCCATTACGA GCCGGCGGTC GTCACCCTCG ACCTTGGCCT GCCGCCCGAT
CCCGACGGCA CGAGCGAGGG CTTCGCCACG CTCGACGCGA TCCTGTCGCT CAAGCCGGAC
ACCAAGGTGA TCGTCGCCTC GGGCCATGGC GCGCGCGAAG GCGCCCTCCG GGCCGTCGCG
GCGGGCGCCT ACGACTATTA CCACAAGCCC GTCGACATCG ACGAGCTCGG CCTGATCGTC
GCCCGCGCCT TCCACCTCCA TGGCCTGGAG CAGGAGAATG CCCGGCTCCA GGCGCAGGGC
GACGGCGATG CCGAGGACGG CCTGCTCACC AACGACCCCG CGATGCTCAA GGTCGTCCGC
ACGATCGAGC GCGTCGCCAA CACCGACGTC TCGGTGATGC TGCTGGGGGC GAGCGGCACC
GGCAAGGAGG TGCTCGCCCG GCTGCTCCAC AAGGCGAGCA AGCGGAGCGG CGGCGCCTTC
GTCGCGATCA ACTGCGCCGC CATTCCCGAG AATCTGCTCG AGGCCGAGCT GTTCGGCTAT
GAGAAGGGCG CCTTCACCGG CGCGATCAAG ACCACCGAGG GCAAGATCGA GCAGGCGCAG
GGCGGCACCC TGTTCCTCGA CGAGGTCGGC GATATCCCAC TGCCGCTCCA GGTCAAGCTG
CTGCGCTTCC TCCAGGAACG GGTGATCGAG CGGATCGGCA GCCGCAAGGC GATCGCGGTC
GACACGCGGA TCGTCTGCGC GACCCATCAG GACCTCGACG CGATGATCGC CGAGGCGCGC
TTCCGCGAGG ACCTCTATTA CCGCCTCGCC GAGATCGTCG TCCGCATCCC GCCGCTCGCG
CAGCGGCCCG GCGACGCGCT GCTGATCGCC CGCGCGCTGC TCAGGAAGCT GGCGCGCGAG
ATGGACTCGC CGGTCAAGGG CTTCGCCCCC GACGCGCTCG CCGCGATCGA CGGCTGGCGC
TGGCCCGGCA ACGTCCGCGA GCTGGAGAAC AAGCTCAAGC GCGCGGTGAT CATGGCCGAC
GGCAAGCTGG TGACCGCCGA CGACCTCGAC CTCACTCCGG ACCGGGAGGA CGGCGGCTAC
CTCAACCTGA AGGCCGTCCG CGAAACCGCC GACCGCGCCG CCATCACCCG CGCCCTCGCC
CGCAGCGAAG GCAATATCTC CAGCGCCGCC AAGATGCTCG GCATCAGCCG GCCGACCCTC
TACGACCTGC TGCGCCAATA CGGGATCGAG GCGTGA
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| Protein sequence | MSTAKPRLLI VEDDEGLQKQ LRWAYEDYEV VSATNRQAAI DALRHYEPAV VTLDLGLPPD
PDGTSEGFAT LDAILSLKPD TKVIVASGHG AREGALRAVA AGAYDYYHKP VDIDELGLIV
ARAFHLHGLE QENARLQAQG DGDAEDGLLT NDPAMLKVVR TIERVANTDV SVMLLGASGT
GKEVLARLLH KASKRSGGAF VAINCAAIPE NLLEAELFGY EKGAFTGAIK TTEGKIEQAQ
GGTLFLDEVG DIPLPLQVKL LRFLQERVIE RIGSRKAIAV DTRIVCATHQ DLDAMIAEAR
FREDLYYRLA EIVVRIPPLA QRPGDALLIA RALLRKLARE MDSPVKGFAP DALAAIDGWR
WPGNVRELEN KLKRAVIMAD GKLVTADDLD LTPDREDGGY LNLKAVRETA DRAAITRALA
RSEGNISSAA KMLGISRPTL YDLLRQYGIE A
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