| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3440 |
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| Symbol | |
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| ID | 5198689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3774310 |
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| End bp | 3776436 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582988 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001263924 |
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| Protein GI | 148556342 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR02916] putative PEP-CTERM system histidine kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.184047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.328768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCGC AGCAGACGGA GCTTCCGCCC GTCTACGCCG CCACCTTGCC CGAACCGGTG
ATCCTCGCCG CGACCCAATG GGGGCACGGC CTCGCGGCCT TCATGTTCGC GGCGCTGGTC
TGCTGGCAGG CGACGGTGCG CAGCGGCGGG CCGCGCCGGA TCGCGCTGAC CCTCGCCTGC
GCGCTGACCG CGCTCTGGTG CGCGCTGGTC GCGCGCTACG GCGCGGGCGG CATATCGTCG
AGCGTGGCGA AGAGCCTCGC CGACATCGCC TGGCTCGGCT TCCTCTTCGC GCTCCAGCCG
CCGGTCGCGG CCGGGCGGCG GCGGCCGGCG ATCATCGCCA TCTACGCGCT GCTCGGGGCG
CTGCTGCTGG CGGCGATCGT CATCAAGCTG CTGCCGCTCG CCTTCACCGG CAGCCCGCGC
ATCCAGGCCG GCCTGTTCCT GACCGGCCAG TCGCTGCGCG TCGCCAGCGC GATCGGCGGC
CTCTGCCTGC TCCACAATCT CTATACCGCC GCCTCGCCGG AGGCGCGCTT CGGGCTCGGC
TCGCCGATGC TGGCGCTGGC GGTGATGTGG ACCTTCGACC TCAACCTCGC GACCGTCGCC
TATCTGATCA ACGGCTGGCC GACCGGGCTG TTCGGGCTGC GCGGGGTGGT GATGGTGCTG
ATCGCGCCGC TGCTGGTGAC GGTCAGCCGG CTCGCCACGC TCGATCGGAT GCGGGTGTCG
CGCGCCACCG GCTTCCAGAC GCTGACGCTG GTGCTGAGCG GCGCCTATCT GGCGGCGATG
GTGCTCACCG CGCGGCTGCT CGCGGTGGTC GGCAACCTCG CTTTGCTGCC GCGGCTCACC
GTCGCCGCCT TCTTCGTCGC CTTCGCGCTC TCGCTCTTCC CGTCGACCCG CTATCGCCAG
CGGCTCAAGA AGACGCTCGG CCGCCAGCTC TTCCAGCATC GCTACGACTA TCGCCTCGAA
TGGCGCCGCT TCACCGAGAC GGTCGGCCAG CCCGGCGAGG ATGCGCCGCC GCTCGCCGAA
CGGACGGTGA AGGCGATCGC AGACATCTTC GACTGTCCCG GCGGCCTGCT GATGCTGTGC
GGCCCCGACG GCGGGCTGGA GGCGTCGGCG CGCTGGAACT GGCCGTCGCT CGATCCGCCG
CTCGCCGCCG CCGGCACCGG CCTCGCCCAG CATCTCCAGG CCGACGGCGT CGTCGAGGTC
GAGCGGCTGC GCCGGGGCGA GGAACCCGAG GCGGCGGCGC TGGTTCCCGC CTGGATGGTC
GAGGAGGAGG AGGCCTGGGC GCTGGTGCCG CTGATCCATT TCGACCGGCT GGTCGGCGCG
GTGCTGCTCG AACGCCCGCG CGAGCCGCGC CTGCTCGACG ACGAGGACCA CGACCTGCTC
CGCGTGGCGG GGCGGCAGGT CGCCAGCTAC CTCGCCGAGG CGCGCGGGCA GGAGGCGCTG
TCCGACGCGC GCCGCTTCGA CGAGTTCAAC CGGCGCTTCG CCTTCATCAT GCACGACATC
AAGAATCTGG TGAGCCAGCT CAGCCTGCTC GCCCGCAACG CCGAACGCCA CGCCGACAAG
CCCGAGTTCC GCGCCGACAT GATCGACACG CTGCAGAATT CGGTCGGCAA GATGAACGAC
CTGCTCGCGC GCCTGTCGCA GCATCATCGC GCCCGGCCCG ACGAGCCCGC CCCCCATTCG
CTGCGCACGC TGGTCGAGGA GGTGGTGCGC GATCGCTCGG GCGGCCATGG CATCCGCATC
GTCGGCCGCG ACGATGTGAT GGCGACGGTC GATCCCGACC GCTTCCAGCA GGCGCTCGGC
CACCTCGTCC AGAACGCGAT CGACGCGAGC GATCCGGCCG CGCCGGTCGA GGTCGCGATC
GGCCGGCGCG GGCTGGAGGC GGTGGTCGAG GTCGTCGATC GCGGCTGCGG CATGTCGGCC
GAGTTCGTCC GCACCCGCCT GTTCCATCCC TTCTCCTCGA CCAAGGACGG CGGCTTCGGC
ATCGGCGCCT ATGAGGCGCG CGCGCTCGTC ACCGGCATGG GCGGCCGGCT GGAGGTGCAG
AGCCGTCCCG GGGAGGGAAG CCGTTTCACC ATCGTCCTGC CGCTGACCGC GCTGCTCGGC
GGCGACCTGT CGAAGGGAGC CGCATGA
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| Protein sequence | MLAQQTELPP VYAATLPEPV ILAATQWGHG LAAFMFAALV CWQATVRSGG PRRIALTLAC
ALTALWCALV ARYGAGGISS SVAKSLADIA WLGFLFALQP PVAAGRRRPA IIAIYALLGA
LLLAAIVIKL LPLAFTGSPR IQAGLFLTGQ SLRVASAIGG LCLLHNLYTA ASPEARFGLG
SPMLALAVMW TFDLNLATVA YLINGWPTGL FGLRGVVMVL IAPLLVTVSR LATLDRMRVS
RATGFQTLTL VLSGAYLAAM VLTARLLAVV GNLALLPRLT VAAFFVAFAL SLFPSTRYRQ
RLKKTLGRQL FQHRYDYRLE WRRFTETVGQ PGEDAPPLAE RTVKAIADIF DCPGGLLMLC
GPDGGLEASA RWNWPSLDPP LAAAGTGLAQ HLQADGVVEV ERLRRGEEPE AAALVPAWMV
EEEEAWALVP LIHFDRLVGA VLLERPREPR LLDDEDHDLL RVAGRQVASY LAEARGQEAL
SDARRFDEFN RRFAFIMHDI KNLVSQLSLL ARNAERHADK PEFRADMIDT LQNSVGKMND
LLARLSQHHR ARPDEPAPHS LRTLVEEVVR DRSGGHGIRI VGRDDVMATV DPDRFQQALG
HLVQNAIDAS DPAAPVEVAI GRRGLEAVVE VVDRGCGMSA EFVRTRLFHP FSSTKDGGFG
IGAYEARALV TGMGGRLEVQ SRPGEGSRFT IVLPLTALLG GDLSKGAA
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