| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3439 |
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| Symbol | |
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| ID | 5199197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3772892 |
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| End bp | 3774280 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582987 |
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| Product | sugar transferase |
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| Protein accession | YP_001263923 |
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| Protein GI | 148556341 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
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| TIGRFAM ID | [TIGR03013] sugar transferase, PEP-CTERM system associated
[TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.248565 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.311442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGAGGA TCTTCAAACA TTATATCGCC TATCCGGTGC TGCTTCTCTG CGTGATCGAC
TTCGCGGTGC TGCTGCTCGT CGCCGAGGCG GGCTGGGTGC TGCGCCTGCG GCAGATCGGT
GCCGATCCGG GATCGGTGTG GGGCCGGCTG CCCCAGCTGC TGACCTTCGC GCTGGCGATC
CAGGCGCCGA TGATCGGCGT CGGCGTCTAT GCCGCGGAAT CGATGCAGAC CTTCCGCTTC
GCGGCGGCGC GGCTGCTGGT CGCGATCTCG CTCGGCGTCA TCCTGATCTC GGTGCTGCAC
TTCGTCTCGC CCGGCATCAC CCTGTGGCGG TCCAACTCGC TCTACTCGAT GGTGCTCGCG
GTCGTGCTGC TGCTGATGGT GCGCGTCCTG CTCGGCGGCT TCGTCAGCGG CGACAGGTTC
AAGCGCCGCA TCCTGCTGCT CGGCGCCGGC CAGCGCGCCA GGCGGGTGGC CAATCTCGAG
AATCGGGTCG GCTCCAGCTT TCTGATCGCC GGCTGCGTCG ACATGAAGGA CGCGCCGCCG
CAGATCGAGA CGGCGATCTC GCGGACCGAG GTCGAAAGCC TGTCCGAGCT GGTCGAGACG
ACCCAGGCGA ACGAGGTCGT CCTCGCGCTC GACGAACGCC GCAACACCGT GCCGGTCGAC
GCGCTGCTTC GGCTCAAGAC CACCGGCGTC CACGTCACCG ACATCTCCGA CTTCCTCGAA
CGCGAGACCG GGCGGATCGA CCTCGACACG GTGCGGCCGT CCTCGCTGAT CTTCTCCGAC
GGCTTCTCCT CGGGCCGCGA GCTGTCGATG GTGCTCAAGC GCGGCTTCGA TCTGCTGCTC
AGCGCCTTCC TGCTGATCCT CGCCGCGCCG ATCATCCTCG TCACCGCGCT GCTCGTGAAG
CTCGACAGCC CCGGCCCGGC CTTCTACCGG CAGGTCCGCG TCGGCCGCTT CGGCGCCACC
TTCGAGATCC TCAAGCTCCG CTCGATGCGG CAGGATGCGG AGGCCGGCGG CGCCGCGATC
TGGGCGCAGC AGGGCGACCC GCGCGTCACC CGCATCGGCA AGATCATCCG CCTGATCCGG
GTCGACGAGC TGCCCCAGCT CTGGACCGTG CTGAAAGGGC AGATGAGCTT CGTCGGGCCG
CGCCCCGAAC GCCCCGAATT CGTCGCCGAG CTCGAACGGC AGATCCCCTT CTATGCCGAG
CGGCACATGG TGAAGCCCGG CATCACCGGC TGGGCGCAGA TCAACTATCC CTATGGCGCC
AGCCTCGACG ATGCGCGGCA CAAGCTCGAA TATGACCTCT ACTACACCAA GAACTACAGC
CCCTTCCTCG ACCTGCTGAT CATCCTCCAG ACGATGCGCG TCCTGCTCTG GGCCGAAGGC
GCCCGGTAA
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| Protein sequence | MLRIFKHYIA YPVLLLCVID FAVLLLVAEA GWVLRLRQIG ADPGSVWGRL PQLLTFALAI
QAPMIGVGVY AAESMQTFRF AAARLLVAIS LGVILISVLH FVSPGITLWR SNSLYSMVLA
VVLLLMVRVL LGGFVSGDRF KRRILLLGAG QRARRVANLE NRVGSSFLIA GCVDMKDAPP
QIETAISRTE VESLSELVET TQANEVVLAL DERRNTVPVD ALLRLKTTGV HVTDISDFLE
RETGRIDLDT VRPSSLIFSD GFSSGRELSM VLKRGFDLLL SAFLLILAAP IILVTALLVK
LDSPGPAFYR QVRVGRFGAT FEILKLRSMR QDAEAGGAAI WAQQGDPRVT RIGKIIRLIR
VDELPQLWTV LKGQMSFVGP RPERPEFVAE LERQIPFYAE RHMVKPGITG WAQINYPYGA
SLDDARHKLE YDLYYTKNYS PFLDLLIILQ TMRVLLWAEG AR
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