Gene Swit_3435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3435 
Symbol 
ID5199193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3768270 
End bp3768635 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content67% 
IMG OID640582983 
Productresponse regulator receiver protein 
Protein accessionYP_001263919 
Protein GI148556337 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.465011 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.396609 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCAGC CCCCCGTGGG GACGAGGGTC CTGATCGTCG AAGACGATAC GATCATCGCG 
ATGACCGCCG AAGACATGCT CGACGAATGT GGTTGCAAGA CGGCGGCGAT CGCCGTCTCG
GTCGCCGAGG CGCTGGCCCG CGCGGCCGAC ACCGATTTCG ACATCGCGCT GCTCGACCTC
AACCTGAAGG ACGAGAACAG CCTGCCGGTC GCGCAGCACC TGCGCGACGC CGGCAAGCGC
TTCATCTTCG CGACCGGCTA TGACGGGCTG CCTGCCGACA GCGGCTTCGC CGACGCGCCG
GTGATCTCCA AGCCCTACCG GATCGAGCAG CTCGCCACGG TGATCGCGCA GACGCTGTCG
GACTGA
 
Protein sequence
MSQPPVGTRV LIVEDDTIIA MTAEDMLDEC GCKTAAIAVS VAEALARAAD TDFDIALLDL 
NLKDENSLPV AQHLRDAGKR FIFATGYDGL PADSGFADAP VISKPYRIEQ LATVIAQTLS
D