Gene Swit_3432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3432 
Symbol 
ID5198992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3765360 
End bp3766145 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content68% 
IMG OID640582980 
Product3-hydroxybutyrate dehydrogenase 
Protein accessionYP_001263916 
Protein GI148556334 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01963] 3-hydroxybutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.296547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCTGA AGGGCAAGAC CGCGCTGATC ACCGGCTCCA CCTCCGGCAT CGGCCTCGCT 
TATGCCAAGG CGCTCGCCGC CGAGGGCGCC AATGTCGTGA TCAACGGCTT CGGCGACGCC
GACGCGATCG AGGCCGAGCG CAAGGCGCTC GAGGCGGCGA GCGGCGCGCG CGCCCTCTAC
AGCGGCCACG ACCTGACGAA GGTCGATCAG ATCGAGGCGA TGATGGCGGA GGCCGCCGCC
GCGTTCGGCG GGGTCGACAT CCTGATCAAC AATGCCGGCG TCCAGCATGT CGCCCCGGTC
GAGTTATTCC CGGTCGACAA GTGGAACCTG ATCATCGCGC TCAACCTCAC CAGCGCTTTC
CACACCACCC GGCTGGCGCT GCCGGGCATG AAGGCGAAGC GCTGGGGCCG GATCATCCAG
ACCGCCTCGG CCCATTCGCT CGTCGCCTCG CCGTTCAAGT CGGCCTATGT CACCGCCAAG
CACGGCCTCG CCGGCTTCAC CAAGACGGTC GCGCTCGAGG CGGCGACCTT CGGCGTCACC
GCCAACTGCA TCAGCCCCGG CTATGTCTGG ACCCCGCTGG TCGAGAACCA GATCCCCGAC
ACGATGAAGG CGCGCGGCAT GACCCGCGAG CAGGTGATGA ACGACGTGCT GCTCGCCGGC
CAGCCGACCA AGCAGTTCGT CACGGTCGAG CAGGTCGCGG CGATGGCGCT CTACCTCTGC
CGCGACGAGG CCTCCGCGAT CACAGGCGCC AACATGTCGA TCGACGGCGG CTGGACCGCG
CAATAA
 
Protein sequence
MFLKGKTALI TGSTSGIGLA YAKALAAEGA NVVINGFGDA DAIEAERKAL EAASGARALY 
SGHDLTKVDQ IEAMMAEAAA AFGGVDILIN NAGVQHVAPV ELFPVDKWNL IIALNLTSAF
HTTRLALPGM KAKRWGRIIQ TASAHSLVAS PFKSAYVTAK HGLAGFTKTV ALEAATFGVT
ANCISPGYVW TPLVENQIPD TMKARGMTRE QVMNDVLLAG QPTKQFVTVE QVAAMALYLC
RDEASAITGA NMSIDGGWTA Q