Gene Swit_3430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3430 
Symbol 
ID5196996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3763207 
End bp3764073 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID640582978 
Producthypothetical protein 
Protein accessionYP_001263914 
Protein GI148556332 
COG category[S] Function unknown 
COG ID[COG3798] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.700261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTATG AACGCAGCAC CGGTCGCTAT TATCGCGACG AGGGCGACCG GCGATACGGC 
CTGCCCGATC GCGGCGACTA TCGCGATCGG GCGTATCGCG ACTATCGGGC GCGGTCCTGG
GACGACGGCC AGCCGCGCGA CTATGACGAG GATCGCGGCT TTCTCGATCG GGCCGGCGAC
GAACTGCGCT CCTGGTTCGG CGACGAGGAG GCCGAACGCC GTCGCCGCTG GGACGAACGG
CTCCGCCAGC GCGACCATGA TCGCCGCTAT GGCGACGCCG ACGCCTATGA CGGTGGCCGC
TACGCCGGCG CCCGGGCGGG CGACCTGCGC GGCCCCGACG CGGGCGGGGG CTTCTACAAT
CCCTCGGGCG CCGACTATGG CGTCGGCCGC GGCGCGGGCG CGACCAGCAC CTGGGGCCTG
GGCGGCGGCG CGGCGCACGA CGGCTGGGGC CTCGATCCCA ATTATCGCGC CTGGCGCCGC
CGCCAGCTTG CCGAGCTCGA TCGCGACTAT GAGGATTATC GCCGCGAGAA CGAGGCCCGC
TTCCACAATG ACTTCGGAAG CTGGCGCAGC AACCGCCAGT CGCAGCGCGC CTCGCTCGGC
CATGTCCAGG AGCATCAGGA GGTGGTCGGC GCCGACGGCG CCCATATCGG CACGGTCGAT
CATGTCCGCG GCGACCGCAT CCTGCTGACC AAGGGCGACC GCGACGCCGG CGGCCATCAT
CATTCGGTGC CCTGCGCCTG GATCGCCGAG GTCAGCGACA AGGTGACGCT CAACCGCACC
GCCGCCCAGG CCCAGGCGGC CTGGAAGGAC GAGGAGCGCA GCGAGGGCCC GCATTATCTC
AACCGGGCCT TCCCGGGCAC CTACTGA
 
Protein sequence
MGYERSTGRY YRDEGDRRYG LPDRGDYRDR AYRDYRARSW DDGQPRDYDE DRGFLDRAGD 
ELRSWFGDEE AERRRRWDER LRQRDHDRRY GDADAYDGGR YAGARAGDLR GPDAGGGFYN
PSGADYGVGR GAGATSTWGL GGGAAHDGWG LDPNYRAWRR RQLAELDRDY EDYRRENEAR
FHNDFGSWRS NRQSQRASLG HVQEHQEVVG ADGAHIGTVD HVRGDRILLT KGDRDAGGHH
HSVPCAWIAE VSDKVTLNRT AAQAQAAWKD EERSEGPHYL NRAFPGTY