| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3426 |
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| Symbol | |
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| ID | 5199026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3758545 |
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| End bp | 3759234 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582973 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001263910 |
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| Protein GI | 148556328 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.307484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.28274 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGCAC GGGACGTCCC GGCGCTGACC GACATCGAAC TGGCGCGGCG CATCGGCCTG
CGCGATCCCG CCGCCGTCCG CTGGATGACG ACGCGCAACA ACCAGCGCCT GTTCCGCACG
GCGTGGAGCA TCCTCGGCAA CCGTGCCGAG GCGGAGGATG CCGTGCAGAG CGGCTATGTC
CGCGCCTTCG CGGCGATCGG CAGCTTCGCC GGGCAATCCT CGCTTGACAC CTGGCTGACG
CGGATCGTGA TCAACGAGGC GCTGGGCCGC GCCCGCGCCG CCCGGCGCCG CCGGGCGCGG
CTCGACGCCG ATTCGATAAC CGATCTCGAC GCCTATCGGG AAAGACTGAT GAACGGATCG
ATCGAGCCCG CCGCGCCGGA CGCCTCGCTC GCCATCAAGC AGATGCGCGC GATGCTCGAA
GCCGCGATCA CCCGGTTGCC GGGCGAGTTC CGCACCGTCT TCGTCATGCG CGACGTCGAG
GGGATGTCGG TCGAGGAGGT CGCCGGGGCG CTCGACATCC CGCCCGGCAC GGTCAAGACG
CGGCTGCACC GCGCCCGCCG CCGGCTGCGC GACCTGCTCG CGCCCGATCT GCGGGCGAGC
CTGGTCGGCG CCTTCCCCTT CGCGGGCGAG CATTGCGCGA CGCTGACCGA ACGCGTGGTC
GCCCTGCTCT GCGAGGCGCC GGACGGCTGA
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| Protein sequence | MLARDVPALT DIELARRIGL RDPAAVRWMT TRNNQRLFRT AWSILGNRAE AEDAVQSGYV
RAFAAIGSFA GQSSLDTWLT RIVINEALGR ARAARRRRAR LDADSITDLD AYRERLMNGS
IEPAAPDASL AIKQMRAMLE AAITRLPGEF RTVFVMRDVE GMSVEEVAGA LDIPPGTVKT
RLHRARRRLR DLLAPDLRAS LVGAFPFAGE HCATLTERVV ALLCEAPDG
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