| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3415 |
|---|
| Symbol | |
|---|
| ID | 5199881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3747523 |
|---|
| End bp | 3748449 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640582962 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263899 |
|---|
| Protein GI | 148556317 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3246] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0831805 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGA TCATCATATC CTGCGCGGTG ACGGGAAGCG CGCATGTCCC GACCATGTCG
GACGCGCTGC CGATCACGCC CGAGCAGATC GCGGACCAGT CGATCGCCGC GGCCGAGGCG
GGCGCAGCGA TCCTCCACCT CCACGCCCGC ATGCCCGAGG ACGGCCGGCC GACCGGAGAT
CCCGACGTCT ATGGCCGCTT CCTGCCGGTC ATCCGCCAGG CGACCGACGC GGTCGTCAAC
ATCACCACCG GCGGCGCGAT CACGATGACG GTGGCCGAGC GGCTGGCGGC GGCGGCGCGG
TTCAAGCCCG AGCTCTGCTC GCTCAACATG GGATCGATCA ACTTCGCCTT CTTCCCGGCC
GCGCGGCGCA TATCGTCGTG GAAGCACGAC TGGGAGGAGG GCTATGTCCG CAATTCGGAC
GACTATATCT TCCGCAACAC CTTCCGCGAC ATCGCCTATA TCCTGGAGAC GCTGTCGGAC
GCGGGCACCC GTTTCGAGCA CGAATGCTAT GATGTGGGCC ATCTCTACAA CCTCGCCCAT
TTCCTCGACC GCGGACTGAT CAAGCCGGGC TTCTTCGTGC AGATGGTGTT CGGCATCCTC
GGCGGGATCG GCGCCGACCT CGACAACCTG ATGTTCATGA AGCAGACCTG CGACCGGCTG
TTCGGCAAGG ACGCCTATCA ATGGTCGGTG CTCGCCGCCG GCCGGCACCA GATGCCGTTC
CTGACCCAGG CCGCGCTGCT CGGCGGGCAT GTCCGCGTCG GGCTGGAGGA CAGCCTGTTC
ATCGAGCGCG GCGTGCTCGC CGTCTCCAAT GCCCAGCAGG TCGAGAAGAT CAGGCGCATC
CTGGCCGAGA TGGGGCACGA GCCCGCCACC CCGGCCGAGG CGCGCGAGAT GCTCGGCCTC
AAGGGCGGCG ATCGGGTGGA GTTCTGA
|
|---|
| Protein sequence | MAKIIISCAV TGSAHVPTMS DALPITPEQI ADQSIAAAEA GAAILHLHAR MPEDGRPTGD
PDVYGRFLPV IRQATDAVVN ITTGGAITMT VAERLAAAAR FKPELCSLNM GSINFAFFPA
ARRISSWKHD WEEGYVRNSD DYIFRNTFRD IAYILETLSD AGTRFEHECY DVGHLYNLAH
FLDRGLIKPG FFVQMVFGIL GGIGADLDNL MFMKQTCDRL FGKDAYQWSV LAAGRHQMPF
LTQAALLGGH VRVGLEDSLF IERGVLAVSN AQQVEKIRRI LAEMGHEPAT PAEAREMLGL
KGGDRVEF
|
|---|
| |