| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3412 |
|---|
| Symbol | |
|---|
| ID | 5196759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3744516 |
|---|
| End bp | 3745661 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640582959 |
|---|
| Product | dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein |
|---|
| Protein accession | YP_001263896 |
|---|
| Protein GI | 148556314 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0456561 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGAAC CATTTCCCGG AAATTACGTC TGGAACCTGA GCGTCAACAT CTGCCTGTGC
ATGGGCGCGG CGATGGGCGA GATCGACAAG GCCAATGACG AGGTGCGCGA GATCGCGCGC
GAAGGCGCCG ACAAGGGAAC CGCCGCCTTC TTCGACAGCT GGGGCCGGAT GGCGGACCGG
CTGGTGGAGC TGGGCGAGGA GTGCGAGGCG GCGGGGAACG CGCTGAGCGC CGGCGAGAAG
TACCGGCGCG CGACCGCCTA TTACATGACC GCCGAACGCA TGCAGGCGCG CGACTATGAG
CCCCGCAAGC GGATGTACCG CACCATGCTC GACACGATGC AGCGCGCGAT CGACGCCTCC
GGGCTCGGCT GGGAGCGGAT CGACATCCCG TTCGAGGGAT CGAGCTTCCC CGGCCTGTTC
ATTCCCGGCG AGGGCGAAGG GCCGCGCCCG ACCATGGTGT TCTGCAACGG CCTCGACAGC
GTCAAGGAGA TGATCGCCCT GTCGATCGGC GACACCTTCG CCAGGCGGGG CATCTCGGTG
CTCGCGGTCG ACCAGCCGGG CGTCGGCGAG GCGCTGCGCC TCAATGGCCT GCCCGCGATC
CCCGACACCG AGCGCTGGGC CGGCGCCGCG GTCGACGCCC TCGAAGCGCG CGCCGATGTC
GACAAGGACC GGATCGGGAT GATGGGCTGG TCGCTCGGCG GCTATTACGC GCCGCGCGCC
GCGATCTACG AGAAGCGCTT CAAGCTGTGC GTCGCCTGGG GCGGCAACCA CGACTGGGGC
GGGCTCCAGT CGCGCCGCCT GAAGAACGAG GGCGAGAATC CGGTGCCGCA TTATTGGGAA
CATGTCATGT GGGTGTGGGG CCAGCCCGAC ATGGCCAGCT TCATGGCGCT GATGCCCAAG
GTGACGCTCA ACGGGCATAT GGAGAATATG ACCGTGCCGT TCCTGATCAC CCACGGCGCC
AACGACCGGC AGATCCCGCG CGAATATGCC CATCAGAGCC GTGACCAGGC GATCAACAGT
CCCCGCGTCG AGCTCAAGCT GTTCACCGAG CGCGAAGGCG GCGTCGAGCA TTGCAGCGCC
GACAATATGG AGCCGGTCAA AAGCTACATC GCCGACTGGG TGCGCGATCG TTTCAGCGAG
GTTTAG
|
|---|
| Protein sequence | MYEPFPGNYV WNLSVNICLC MGAAMGEIDK ANDEVREIAR EGADKGTAAF FDSWGRMADR
LVELGEECEA AGNALSAGEK YRRATAYYMT AERMQARDYE PRKRMYRTML DTMQRAIDAS
GLGWERIDIP FEGSSFPGLF IPGEGEGPRP TMVFCNGLDS VKEMIALSIG DTFARRGISV
LAVDQPGVGE ALRLNGLPAI PDTERWAGAA VDALEARADV DKDRIGMMGW SLGGYYAPRA
AIYEKRFKLC VAWGGNHDWG GLQSRRLKNE GENPVPHYWE HVMWVWGQPD MASFMALMPK
VTLNGHMENM TVPFLITHGA NDRQIPREYA HQSRDQAINS PRVELKLFTE REGGVEHCSA
DNMEPVKSYI ADWVRDRFSE V
|
|---|
| |