| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3407 |
|---|
| Symbol | |
|---|
| ID | 5197828 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | + |
|---|
| Start bp | 3739460 |
|---|
| End bp | 3740068 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640582954 |
|---|
| Product | glyoxalase/bleomycin resistance protein/dioxygenase |
|---|
| Protein accession | YP_001263891 |
|---|
| Protein GI | 148556309 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0346] Lactoylglutathione lyase and related lyases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0827637 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTCGGGGC CATCGACTAA CAGCTTGTTT TGCATGGCAA TGGCGATGGG AATTCGCGTC
ACCCTGCGAT TTGAAGACAC GGCATCCAAG GCTAGATTGC AGATGGAAAC AAATATTCAG
CGCCTTTACC ATTTTGCCTT TCCCTGCCGC GATGCGGAAG AGACGCGCGC CTTCTACGAG
GACCTGCTCA GCCTGCCGCT CGTCCATTGC ATGCAGGTCG ATGCCGTGCC CAGCTCGGGC
GATGCCGGCC CCTACGCCCA TATTTTCTTC CAGATGCGCG ATGGATCCTA CATCGCCTTC
TTCGATCTCG GCGGCGATGA ACCGCCTGAG CCATCGCCCA ACACGCCTCG CTGGGTCCAG
CATTTCGCGA TGGAGGTTCC GGATCTTGCC GATGTTCTCG CCTATCGCGA CCGGCTGGTC
GCGGCGGGCG TCGAGGTGAC CGGCATCGTC GATCATGATT TCATCAAATC CATCTATTTC
TTCGATCCCA ATGGGCTTCG GCTGGAAATA ACCACCCGTA CCGAGAAGCC CGGCTTCAAC
GAGAAGGCGG CGGCGGAGGC GCATGCGAAA CTTGCGGCCT GGTCGCGCTT CAAACATGGC
CGCAACTGA
|
|---|
| Protein sequence | MSGPSTNSLF CMAMAMGIRV TLRFEDTASK ARLQMETNIQ RLYHFAFPCR DAEETRAFYE
DLLSLPLVHC MQVDAVPSSG DAGPYAHIFF QMRDGSYIAF FDLGGDEPPE PSPNTPRWVQ
HFAMEVPDLA DVLAYRDRLV AAGVEVTGIV DHDFIKSIYF FDPNGLRLEI TTRTEKPGFN
EKAAAEAHAK LAAWSRFKHG RN
|
|---|
| |