Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3404 |
Symbol | |
ID | 5198763 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3735482 |
End bp | 3736342 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640582951 |
Product | 3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoAhydratase |
Protein accession | YP_001263888 |
Protein GI | 148556306 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2030] Acyl dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.076763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCTGA ATCACGAACG CTTGCTGACG CTTCAGTTGC CGGATCGCAG GCAGGACTTC AGTCGGAAGG ATGCCATATT CTATGCGCTC AGCATCGGTG TCGGCACCGA TCCGCTCGAC CCCGACCAGC TCAAATTCGT CTATGAGAAG GAGCTTCAGG CATTTCCCGC CATCGCCCAT ATTCTCGCCA TGGAGACCGA CTGGATCTTT GATCCGGCCA ACGGCCTCGA TCTCACGCGG CTGTTGCATC TCGACAGCGG GCTTACCATG CACCAGCCGC TTCCGCCGGC AGGTACGCTC AACAGCAAGA TGCGGATCAG CGCGGTCCAT GATCAAGGCG AAGGCCGCGG CGCAATCGTT CGATTTGATC GCGACCTTTA CGATGTGGAT CGCGATATGC TGTGCGCGAC CGTCACCGGC GCCTTCTATC TGCGGGGACA AGGCGGCTTC GGCGGAGCGG CGCCCCCGCT GTCGTCCGCG CCGGTCGTAC CGGACCGCGC GCCGGATGCC AGTTGCGACC TGCCGACGCA TCCGGAAGCG GCCCTGCTCT ACCGGCTCAA TCACGACATG AACCCGATCC ACGTCGATCC GGCGATCGCG CGCGCAGCCG GCTTCGAGCG ACCGCTGCTC CATGGTGCCT GCACCTATGC CATCGCCTGC CATGCCTTCG TGCGCAGCCT GTGCGGTTAT GACGCCGCAC GTCTTCGCCG CTTCGATGCC CGTTTTTCAG CGCCGGTTTT CCCCGGCGAT ACGTTGAGGA CGGATTTCTG GGCGATCGGC GACAATCGCT TTGCCTTCAC CTGTCGGGCT GTCGAGCGGG ATATGATTGT CTTGAACAGC GGATTGGCCG CGCACTATTG A
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Protein sequence | MALNHERLLT LQLPDRRQDF SRKDAIFYAL SIGVGTDPLD PDQLKFVYEK ELQAFPAIAH ILAMETDWIF DPANGLDLTR LLHLDSGLTM HQPLPPAGTL NSKMRISAVH DQGEGRGAIV RFDRDLYDVD RDMLCATVTG AFYLRGQGGF GGAAPPLSSA PVVPDRAPDA SCDLPTHPEA ALLYRLNHDM NPIHVDPAIA RAAGFERPLL HGACTYAIAC HAFVRSLCGY DAARLRRFDA RFSAPVFPGD TLRTDFWAIG DNRFAFTCRA VERDMIVLNS GLAAHY
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