| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3403 |
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| Symbol | |
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| ID | 5198762 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3734361 |
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| End bp | 3735311 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640582950 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263887 |
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| Protein GI | 148556305 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 56 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0710796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAGGC GACTCGAGGG GCGTGTTGCA GTGGTGACGG GGGCTGGACG GGGTCTTGGC
GCCGCATATG CGTTGGCGCT TGCCGATCAT GGCGCGAAGG TGGTGCTCAA CGATCTCGGC
GCCGGCTTGC AGGGTGAAAA AATTGACGAG GATCCGGTGG TCCAGGTGGC CGAAGCGATC
CGCGCAAAGG GCGGAGAGGC GGTGATCGAC CGAGGCGACG TTGCCGATTT CGATGCAGCG
GGCCAACTGA TCGAAACCGC GCTGTCCAGT TTCGGGGCGC TCGACATCCT CATCAACAAT
GCCGGCATTC TGCGCGATCG CATGCTGGTC AACATGACCG TGCAGGAATG GGATGACGTG
ATCCGCGTGC ACCTGCGCGG TCATTTCTGC CCGACGCAGC ACGCCGCCGT CCATTGGCGG
GAGCGGGCGA AGCAGGGCAA GGCGGATGCG GTGCTGATCC ACACCACCAG CATTGCCGGA
CTCCACGGCA ATGCCGGCCA GGCGAATTAT TCGACCGCGA AGTCGGGGCT CGCCACCTTG
GCCTATCTCA ACCATCTCGA GCTCCATGCC CGCTATGGTG TCCGCGCCTA TGCGATTGCG
CCCAATGCGC GGACGCGGCT GACGCTGAAC TCGCCGGGCG CCGCCGATCT GGTGCGTGAA
CCGGAAGCAG GCACGTTCGA TTATTTCAGC CCCGACAATG TCGCGGCCTT CGTCGCCTGG
CTGGGGGCGG CCGATTGCGC CGCACCCTCG GGCACCATCT ATGGAGTCGA GGGTGGGTTG
GTGCGTCGCT ATGACGCGTG GCACATCGCA ACATCGATCA ACAATGGCGA CAAGCGCTGG
ACGTTCGAGG AACTCGACGC GCGTGTCGAC GAACTCGCGG CCGGGCATGA GCGGACCTTC
ACGCCGCTCT CCGAGATCCT CATCGCCCCG GGGCAGGCGC CCAGGGCATG A
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| Protein sequence | MTRRLEGRVA VVTGAGRGLG AAYALALADH GAKVVLNDLG AGLQGEKIDE DPVVQVAEAI
RAKGGEAVID RGDVADFDAA GQLIETALSS FGALDILINN AGILRDRMLV NMTVQEWDDV
IRVHLRGHFC PTQHAAVHWR ERAKQGKADA VLIHTTSIAG LHGNAGQANY STAKSGLATL
AYLNHLELHA RYGVRAYAIA PNARTRLTLN SPGAADLVRE PEAGTFDYFS PDNVAAFVAW
LGAADCAAPS GTIYGVEGGL VRRYDAWHIA TSINNGDKRW TFEELDARVD ELAAGHERTF
TPLSEILIAP GQAPRA
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