| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3400 |
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| Symbol | |
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| ID | 5198759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3731608 |
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| End bp | 3732789 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640582947 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001263884 |
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| Protein GI | 148556302 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0361519 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGCAG GCGCGCAGCA AGGCGGGCAG GATGGCACGG TGATGGACGC AGGTGGCCTG
CCGCTTGCGG GCCTATGCGT GGTCGATCTC GGCGGGATCG GGCCGGGCCC GTTCTGCAGC
CTCGTTCTTG CCGCACTCGG CGCCTCGGTC ATCCGCTTCG AACGCCCGTC GCGGGCGGGG
GATGGCGACC TGGTCGACCC TTTCGCCGAC GGGCGGGCAA CGATCCATGC CGATCTCAAG
ACGCCGGAAG GCAAGGCCGC GGCGCTGTCG CTCGTCGGCA AGGCGGATAT GCTGATCGAA
GGCTTCCGGC CGGGCACGAC CGAGCGGTTG GGGCTCGGCC CCGACGATTG TGCCGCGCTT
AATCCGCGTT TGATCTATGG CCGGATGACG GGGTGGGGAC AAAGCGGGCC GTTTGCCGCC
GATGCCGGGC ACGATATCAA TTATATCGCG CTGTCCGGGG TGCTGCATGC GATCGGCACT
TGCGAAGGCG GGCCGGTGGT GCCGCTCAAC CTGCTCGGCG ATTTTGCGGG CGGATCCTTT
TTCCTGATCA TCGGCCTGCT CGCGGCACTT GCCGAGCGCG AACGCTCCGG GCGCGGCCAG
GTGATCGATG CGGCGATCGT CGATGGGACG GCGGCGCTCA GTTGGTTCAT CCAGGCGCTA
CGGCGACATG GCGCCTGGCG GGACGCACGC GAGGCGAACC TGCTGGACGG CGGCGCACCC
TGGTATGGAG TCTATGAAAC GGCCGATGGC GGTCATGTCG CGCTGGGCGC GCTCGAACCG
CAATTTTACG ATCGCTTCGC TGCCGTGGCC GGGCTGGATA TCGATACCCT GCCGTCGCGC
GACGACCCCA CCCAATGGCC GGCCTTGAGA GCGCGCATCG CGACATTGTT TCGAAGCCGC
AGCCGGGATG AGTGGGCCAG GCTGTTCGCC GGCAGCGATG CCTGCGTCGC ACCGGTGCTG
TCCTTGTCCG AGGCGCCGCG CCATCCCCAT GTCATGGCGC GCGGTGTCTT CGACGCGGGC
GGCGGCGATC TGCCGCGCCT CACGCCATTG TTCGGCCGGA GCCCGACGCG GCGGGGATAT
GGCACCAGCG AACATGGCGA CCTTGGCGCA TGGAACCTCA GCGATGCCGA GGCCGCCCTC
GTCTCCTTCG GCGGAGCGGG AGTCTCTCGC CGTTCGACCT GA
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| Protein sequence | MQAGAQQGGQ DGTVMDAGGL PLAGLCVVDL GGIGPGPFCS LVLAALGASV IRFERPSRAG
DGDLVDPFAD GRATIHADLK TPEGKAAALS LVGKADMLIE GFRPGTTERL GLGPDDCAAL
NPRLIYGRMT GWGQSGPFAA DAGHDINYIA LSGVLHAIGT CEGGPVVPLN LLGDFAGGSF
FLIIGLLAAL AERERSGRGQ VIDAAIVDGT AALSWFIQAL RRHGAWRDAR EANLLDGGAP
WYGVYETADG GHVALGALEP QFYDRFAAVA GLDIDTLPSR DDPTQWPALR ARIATLFRSR
SRDEWARLFA GSDACVAPVL SLSEAPRHPH VMARGVFDAG GGDLPRLTPL FGRSPTRRGY
GTSEHGDLGA WNLSDAEAAL VSFGGAGVSR RST
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