| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3396 |
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| Symbol | |
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| ID | 5201010 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3726429 |
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| End bp | 3727475 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640582943 |
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| Product | vanillate monooxygenase |
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| Protein accession | YP_001263880 |
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| Protein GI | 148556298 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00111775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0140003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTTTG TCAGAAACTG CTGGTACGTC GCCTTGTGGA GCGAGGACCT CCACAGCGGC
GCGATCGAAA ACCGTATCAT ATTGTCGGAG CCGGTAGTGT TCTACCGCGA CCAGCAGGGG
CAGCCTGTCG CCCTGTTCGA TATCTGTCCG CATCGCTTCG CGCCGCTCAG CAAGGGACGA
TTGCTGCCGG GCGGTGGCAT CGCCTGCGGC TATCACGGGC TTGAATTCGG TGCCGACGGC
ACCTGCATTC GCAACCCGCA TGGCGATCGC ATCCCCAATC GCGCGCAGGT GAAACGCTAT
CCGCTGGTCG AACAAGACAG CCTGATCTGG ATCTGGATGG GGGATCAGAC GCCTGATCCC
GCCCTCATTC CGCGTTATGA TTTTCTCGAT CCGGTCAACG GCTACACCGT CACCAGCCGC
GAAACGCTGA CCATGCCGTG CGACTATCGG CTGATCGTCG ATAATCTGCT CGACCTCAGC
CACATCAACT TCCTGCATGA CGGCATTCTT GGCCATGCCG ATGCGCCACG CGCGGACATC
AGCGTCACGA CCGGCGACCG CTGGGTGGAG GTCACGCGCA TTTCACGCAA CCTTCCGGTT
CCCGCGCTGT TCGCGATGCT GCTCAATGAT GGATCGGAGC GTGGCGACCT ATGGAACACG
ATCCGCTGGG ATCTTGCCGG CTGCCTCAAA AACGATGCGC TTGTCTGTCC GGTCGGCGCC
GATCGCAACG ACGGCGACGG CATTTTCGGC GCCCATCTGC TGACGCCGGT CACCGAAGAG
ACCACGCTCT ACCATATCGC CGCCGCCCGC CAGAAGACCG CGCGGGCCGG GTCGGAAACG
AGCGAAGAGG TGCGGCAGCG CCTGGGCGAG CTTCGCCGGT TTGCCTTTGA AATGCAGGAT
CAGCCGATGA TCGCCGCACA AGCGGAGATC ATGCGCAAAT ATCCCGAAGC GACCCACCAC
CCGGTCTTTC TGGAGATCGA CACCGGCCCG GCGCAGGCGC AGGCGATCAT CAAACGCCAC
ATCGCAGCGG AAAACAGCCC GGCCTGA
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| Protein sequence | MPFVRNCWYV ALWSEDLHSG AIENRIILSE PVVFYRDQQG QPVALFDICP HRFAPLSKGR
LLPGGGIACG YHGLEFGADG TCIRNPHGDR IPNRAQVKRY PLVEQDSLIW IWMGDQTPDP
ALIPRYDFLD PVNGYTVTSR ETLTMPCDYR LIVDNLLDLS HINFLHDGIL GHADAPRADI
SVTTGDRWVE VTRISRNLPV PALFAMLLND GSERGDLWNT IRWDLAGCLK NDALVCPVGA
DRNDGDGIFG AHLLTPVTEE TTLYHIAAAR QKTARAGSET SEEVRQRLGE LRRFAFEMQD
QPMIAAQAEI MRKYPEATHH PVFLEIDTGP AQAQAIIKRH IAAENSPA
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