| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3393 |
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| Symbol | |
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| ID | 5196542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3720872 |
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| End bp | 3723136 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582940 |
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| Product | ferredoxin |
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| Protein accession | YP_001263877 |
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| Protein GI | 148556295 |
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| COG category | [C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1
[COG2124] Cytochrome P450 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0205639 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGT CACACGAGTC GTGCAAGCAC CGCGAAGCGC GCGGATGCCC CCACCGAGAG
TGCACGATGC CCGACGCCCC CCATTATGAC GTCGATTTCT ACAGCGACGC CTTCATTGCC
GATCCGCTGC CGCATTATGC GGCGATGCGT GCGCTCGGCC CGGTTGTCTA CCTGCCGCAG
CACGACAATT TCGCGATCGT CCGCTTCCGC GAGCTGCGCG AGGCGATGCG CGACATTGCC
ATCTTCCGGT CGGGCGACGG CGTCGCCGGC GACGCTGCGG GTTGCACCTT CCTGCGCGGC
AATACGCTGG CGTCGGACCC GCCGGTGCAC GACAGGATGC GCACCGTCAT GGGCGCCCCG
CTGCTCCCCG GCGCCCTCGA AGCACATCGC GCCTGGATCG AGGAAGAAGC GCTCGCGCTC
GCCGATCGGC TGTGCGACCG GCAGGTCTTC GATGCCATGG TGGATGTCGC CCGGCATCTG
CCGTTGACGA TCGTCACCCA ATTGGTCGGG CTGCCCGAGG ACGGGCGCGA TCATATGCTT
GAATGGGCCG CGGCCTCGTT CGACATTCTC GGCATCCAGA ACGAGCGCGG CCGGCAAGGC
ATCGAGACGA TCAAGGAGAT GCGCCACTGG ATCAAGACCG GCGCGACCAC CGACCGCCTG
AAGCCGGACA GCTGGACAGC ACGGATCGCG GGGCTGGCGC GCGACGGCTC GATCCCGGCC
GACATGGCTC CCCTGCTGAT CCGCGACTAT ATCAATCCCA GCCTCGACAC CACCATCTCC
GCCACCGGCG AACTGCTCTG GCAACTGGCG CGCAACCCGG ATCAGTGGGA CAAGCTCCGC
GCAGATCCAG GCCTGATCCC GCGCGCGGTG GATGAGGCCG TCCGTCTGGC AACGCCGATC
CGTTCCTTCA CGCGCACGAC CACGGCATCG GTGGTGGTGG CCGACACCCC GATCCCTGCC
GGGGCACGGG TGATGATGCT GTTCGCCAGC GCCAATCGCG ATGCGCTTCA TTTTGCCGAT
CCCGACCGTT TCGACGTCGA ACGTCGCGAG CGCGACCATG TCGGCTTCGG TCACGGCATC
CATATGTGCG TCGGCATGCA CCTCGCGCGG CTGGAGATGA CGGCGCTGCT CAAGGCCTTC
CGCACGCGCA TTGCGCGGTT CGAAGCCGAA GCGCCCAGCC CCGCCTACAA CAATACGATT
CGATCCTATG CCGCGATGCC GATGCGGATC ATCGTTGCCG ATCGGGTTGC GGATGACCGG
CCTGCCACCG AAGCGCCACG CGATGTCGCT GCCGAGGCGT CCACTGGCCA AGCAGGCTGG
ATCGACGCCA CCATCGTCGA TCATCGTCTG ATCGCCGAGA CGGTGATGCT CGTCGAATTC
GAAGCGGCTA CGGGCCTGTT CCCGCCGTTC GAGGCGGGAG CCCATATCGA CGTCGAGATC
CGGCCAGGCC TCGTTCGTCA ATATTCGCTC TGCGGACCGC GCGACGATCG GCGGCGCTAT
CGAATCGCGG TCCATCGCGA AGCGCGATCA CGCGGCGGAT CGATCGCCGT CCACGACTGG
CTCGCGCTGG GACAAGCCTT GCGCATCTCG GCGCCGCGTA ACAGCTTCCC GCTGGCTCCC
CCCGACGGAA ATGATGCGCC CGTCATTCTC ATTGCCGGTG GCATCGGCAT CACACCGATC
CTCGCCATGG CCGATCAGCT TCACGCCGAT GCGCGACCTT TCACCCTTAT CTATCGCGCC
CGCAGCAAGG CCAGCGCCGC GTTCGCAGAT GAGCTTGCCG CGGCGCCCTA CGCGTCGAAC
GTCCGCTTCG CCTTCGACGA TGCGCAGGAG CAGCCTTCCG ACCTGCCCGA ACTGGGCGGC
TGCCCCAATC GGAAAAGCGT CTATTGCTGC GGTCCGGCCG GCCTCATCGA TCATGTCCGC
GCACGATGCA GAGCGCTGGG CCTCACCGAC GCGCAGCTTC ATGTCGAGTT GTTCCGCGCG
CCACAGGGCA GTGACGATCG GCCCTTCACG CTCCATGCCG CACGGTCCGG CCTGACGTTG
ACGATACCCG CCGGCCGCTC AATGCTCGAA GTGCTTGAAG AGGCAGGGGT CGAGGTGCCC
AGTTCCTGCT TGTCGGGCAT ATGCGGCACC TGCCTCGTCG ATCTCAGCGC CGGCGCTGCC
GACCATCGCG ACCAGGTCCA GACCGAGGCC GAAAAATCAG CGAATGGCCG CGTCGCGCTC
TGCTGCTCGC GCGCGCTGAG CCCCGAACTG GTGATCGACC TTTAG
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| Protein sequence | MQQSHESCKH REARGCPHRE CTMPDAPHYD VDFYSDAFIA DPLPHYAAMR ALGPVVYLPQ
HDNFAIVRFR ELREAMRDIA IFRSGDGVAG DAAGCTFLRG NTLASDPPVH DRMRTVMGAP
LLPGALEAHR AWIEEEALAL ADRLCDRQVF DAMVDVARHL PLTIVTQLVG LPEDGRDHML
EWAAASFDIL GIQNERGRQG IETIKEMRHW IKTGATTDRL KPDSWTARIA GLARDGSIPA
DMAPLLIRDY INPSLDTTIS ATGELLWQLA RNPDQWDKLR ADPGLIPRAV DEAVRLATPI
RSFTRTTTAS VVVADTPIPA GARVMMLFAS ANRDALHFAD PDRFDVERRE RDHVGFGHGI
HMCVGMHLAR LEMTALLKAF RTRIARFEAE APSPAYNNTI RSYAAMPMRI IVADRVADDR
PATEAPRDVA AEASTGQAGW IDATIVDHRL IAETVMLVEF EAATGLFPPF EAGAHIDVEI
RPGLVRQYSL CGPRDDRRRY RIAVHREARS RGGSIAVHDW LALGQALRIS APRNSFPLAP
PDGNDAPVIL IAGGIGITPI LAMADQLHAD ARPFTLIYRA RSKASAAFAD ELAAAPYASN
VRFAFDDAQE QPSDLPELGG CPNRKSVYCC GPAGLIDHVR ARCRALGLTD AQLHVELFRA
PQGSDDRPFT LHAARSGLTL TIPAGRSMLE VLEEAGVEVP SSCLSGICGT CLVDLSAGAA
DHRDQVQTEA EKSANGRVAL CCSRALSPEL VIDL
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