Gene Swit_3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3392 
Symbol 
ID5196541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3720428 
End bp3720850 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content62% 
IMG OID640582939 
ProductMarR family transcriptional regulator 
Protein accessionYP_001263876 
Protein GI148556294 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0284351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAGC TCGAAACCTT CCTGCCCTAT CGCCTGAACC GGCTGACCGC GCGCGTTTCC 
GAGCGGACGC GCGCCGTCTA TCGGCGCTAT CATGATCTGA CGGTGCCCGA ATGGCGCGTG
TTGGCGTCGC TGTTCGAACA TGAGCGGATG ACTGCGCGCG AAATCGGCCT CTATTCAGCG
ATGCACAAAA CCAAGGTCAG CCGCGCCGTC CGCGCGCTCG AGCAGCGTCG CTGGCTGCGC
CGCGAAACCA ACATGGCCAA TCGGCGCGAG GAGTTTCTAT GGCTGACGTC GCAGGGCAGG
CAGGCCTTCA GCGAAATGGC GCCCGCGCTG CAGATGTTCG AGAATGCGCT GGTGGAGCGG
ACGGGTCACA GCAGAGCTGA TATTCTCGCG ATATTGGACG CCATCGAACA GGCGGTTTGG
TGA
 
Protein sequence
MLKLETFLPY RLNRLTARVS ERTRAVYRRY HDLTVPEWRV LASLFEHERM TAREIGLYSA 
MHKTKVSRAV RALEQRRWLR RETNMANRRE EFLWLTSQGR QAFSEMAPAL QMFENALVER
TGHSRADILA ILDAIEQAVW