Gene Swit_3372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3372 
Symbol 
ID5200339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3699950 
End bp3700519 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content71% 
IMG OID640582918 
Productphospholipid N-methyltransferase-like protein 
Protein accessionYP_001263856 
Protein GI148556274 
COG category[I] Lipid transport and metabolism 
COG ID[COG3963] Phospholipid N-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.180783 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGATC TCGCGGCCTT CCTGCGCGCC TGGGCGAAGG ATCCGCTCGG CATCGCGGCG 
GTGGCCCCGT CCGGTCCGTC GCTCGCCCGT CTGATCACCG CCGAGATCAC CCCCGACATG
GCCCCCGTGA TCGAGCTGGG GCCCGGCACC GGCGTCTTCA CCAAGGCGCT GCTCGAACGC
GGCCTCCAGC AATCGGACCT CGTCCTCGTC GAGAATGAGG CCGATTTCGC CCGGCTGCTC
GAAACCCGCT TCCCGCAGGC CCGCATCCTG CGCGGCGACG CGGCGCGGGT GCGGCGGCAT
CGCGCCCTGT TCGGCGGCGA GCTGGCCGGG GCGACGATCT CGGGCCTGCC GATCCTCAGC
ATGAACGCCG GGCAGCAGAT GAAGATCATG GCGGGCTGCT TCGGGCTGAT GCGCCCCGGC
GGCCGCTTCT ACCAGTTCAG CTACAGCCCG GTCTGCCCGA TCCGCCGTCC TGTGCTCGAG
CGGCTCGGCC TCGAGGCGCG CCGGCTGTCG AGCACGCTCC GCAATCTTCC GCCCGCCGCT
GTCTATGAGA TCAGCCGCGT CGACGAGTGA
 
Protein sequence
MSDLAAFLRA WAKDPLGIAA VAPSGPSLAR LITAEITPDM APVIELGPGT GVFTKALLER 
GLQQSDLVLV ENEADFARLL ETRFPQARIL RGDAARVRRH RALFGGELAG ATISGLPILS
MNAGQQMKIM AGCFGLMRPG GRFYQFSYSP VCPIRRPVLE RLGLEARRLS STLRNLPPAA
VYEISRVDE