Gene Swit_3360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3360 
Symbol 
ID5200291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3688986 
End bp3690056 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content72% 
IMG OID640582906 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001263844 
Protein GI148556262 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.20425 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCAC CGACGTTGTT CGATCCGGTC GCGCTCGGCG CGCTGCGGCT GGCCAACCGC 
ATCGTCATGG CGCCGATGAC GCGCAGCCGC GCCGACGAGG GCGACCGCCC GACCGACCTC
CATGTCGACT ATTATGCCCA GCGCGCCGAT GCCGGCCTGA TCGTCAGCGA GGGCATCCAC
CCCTCGATCA TGGGCAAGGG CTATGCGCGC ACTCCCGGCC TCTACGACGA TTCGCAGGTC
GCGGCCTGGC GCAGGGTGAC CGACGCGGTC CACGCGCATG GCGGGGTGAT CGTCGCGCAG
CTCATGCATG TCGGGCGGAT CGCGGCACAG GCGAACCGGC CGGCGGGCGT CGACGTCGTC
GCCCCCTCGG CGATCGCGGC GAAGGCTAAG CTATGGACCC CCGCCGGAAT GGCGGGGACG
ATGGCGCCGC GCGCGCTGGA GACGCAGGAG ATCGCCGGCG TCGTGCAGGA TTACGCGCTG
GCGGCGGCCC GCGCGATCGC CGCCGGCTTC GACGGGGTCG AGCTCCACTG CACCTCGGGC
TATCTGCCCG CCCAGTTCAT GGCGACCGGC GCCAACCGGC GCACCGACCG CTATGGCGGG
TCGGCCGCGA ACCGCGTCCG CTTCGTCGTC GAGACGATCG AGGCGCTGGC GGGGCGGATC
GGCGCGCGCC GGGTCGGCTT CCGCATCTGC CCCGGCAATC CGTTCAACGA CCTGCACGAC
GACGACCCGG CGGAAACCCA TGCGGCGCTG CTCGATGCGA TCGGCGGGCT GGGCCTCGCT
TATTGCCACC TGATCGAGAT GGCGACGCCG CAGGCCGTCG ACCATCGCGC CCTCGCCGCC
GCGCATTGGC GCGGGCCGCT GATCCTCAAC GACAGCCTCG ACCAGGCGAA GGCCGAGGCG
CTGGTCGGCG CGGGCATCGC CGACGCGGTC TCCTTCGGCC GGCCGTTCAT CGGCAATCCC
GACCTGGTGG CGCGCTTCCG CGACGGCCAT CCGCTGGCCG GCTTCGACCC GACGACGCTC
TATGCCGAAG GGGCGACGGG CTATACCGAC TATCCGGCCT ATCACGCCTG A
 
Protein sequence
MPAPTLFDPV ALGALRLANR IVMAPMTRSR ADEGDRPTDL HVDYYAQRAD AGLIVSEGIH 
PSIMGKGYAR TPGLYDDSQV AAWRRVTDAV HAHGGVIVAQ LMHVGRIAAQ ANRPAGVDVV
APSAIAAKAK LWTPAGMAGT MAPRALETQE IAGVVQDYAL AAARAIAAGF DGVELHCTSG
YLPAQFMATG ANRRTDRYGG SAANRVRFVV ETIEALAGRI GARRVGFRIC PGNPFNDLHD
DDPAETHAAL LDAIGGLGLA YCHLIEMATP QAVDHRALAA AHWRGPLILN DSLDQAKAEA
LVGAGIADAV SFGRPFIGNP DLVARFRDGH PLAGFDPTTL YAEGATGYTD YPAYHA