Gene Swit_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3357 
Symbol 
ID5199494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3685591 
End bp3686502 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content74% 
IMG OID640582903 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001263841 
Protein GI148556259 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.697717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGATC CGGTCTTGCA GCAAATGATT GAGGCGATGG CGGCGAGCGG CTTCGCCTTG 
CCCGACCCGC TCGAGGCGAC GGCGATGCGC GCGCTGATGG ACAATCCCTT CCCGACCGCG
CCGATCGAGG TCGCCGAGGT GCGCGACGTG GAGGTCGACG GCGCCGCCGG CCCGATCGCG
GCGCGGCTCT ACCATCCCCG GCCGGGCGAG ACGCTGCCGG TCGCGGTGCT GTTCCATGGC
GGCGGCTGGG TGGTCGGCAC GCTCGACACG CATGACGGGC TGGCCCGCGT GCTGGCGCGC
GACGCGGGCT GCGCGGTGCT GTCGGTCGCC TATCGCCTCG CTCCCGAGCA TCGCTTTCCC
GCGCCGGTCG ACGACTGCAT CGCCGCGGTG AAGGGCTTGC CCGCCCGGGC GGCAGGCTTC
GGCATCGACG CCGGCCGCCT CGCGCTGGTC GGCGACAGCG CTGGCGGCAA CCTCGCCGCG
GCGGCGGCGC TGGCGCTGCG CGGCGGCGCG GTCGCGCCCC GCGCGCAGGT GCTGTTCTAC
CCGGTGATCG ACAACGACTT CACGACGCCG TCCTACCGCG CCAATGCCGC GGGCGGCCTG
CTGACCAACG AGATGATGGC CTTCTTCTGG GATGCCTATC TCGGCGCGGC CGACCCGCAC
GAGCTGGCGA TGCCGATCCG CGCCGCCGAC CTGACGGGGG TCGCCCCGGC GACGATCGTC
CTCGCCGGCA ACGATCCGCT CCATGACGAG GGCGCCGCCT ATGCCGCGAA GCTGCGCGCG
GCGGGGGTTC CCGTCGACCT GCACGACTTC GCGGGCGGCA TCCACGGCTT CGCGAGCTTC
TTCGGCATCG CCCCGATCGC CGACGAGGCG GTCGCCGTGG CGGCGGCGGC GCTGCGCAAG
GCGCTCGGCT GA
 
Protein sequence
MIDPVLQQMI EAMAASGFAL PDPLEATAMR ALMDNPFPTA PIEVAEVRDV EVDGAAGPIA 
ARLYHPRPGE TLPVAVLFHG GGWVVGTLDT HDGLARVLAR DAGCAVLSVA YRLAPEHRFP
APVDDCIAAV KGLPARAAGF GIDAGRLALV GDSAGGNLAA AAALALRGGA VAPRAQVLFY
PVIDNDFTTP SYRANAAGGL LTNEMMAFFW DAYLGAADPH ELAMPIRAAD LTGVAPATIV
LAGNDPLHDE GAAYAAKLRA AGVPVDLHDF AGGIHGFASF FGIAPIADEA VAVAAAALRK
ALG