| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3355 |
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| Symbol | |
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| ID | 5199492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3683505 |
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| End bp | 3684272 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582901 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263839 |
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| Protein GI | 148556257 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.685113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGGGG GCAGCTTCGA GGGCCAGGTC GCCCTCGTCA CCGGCGGCGG ATCGGGCATC
GGCCGCGCCG CCGCCCGGCG CTTCGCCGCC GAGGGCGCCG CGGTGGTCGT CGCCGACCTG
AACGGGGAAG GCGCCGCCGC CACGGCGGCG CTGATCCGGG AGGCCGGCGG CCGCGCGACC
GCGGTCACCG CCGACGTCGC GAGCGAGGCC GACAACCAGG CGATGTTCGA CGCCGCCGAG
CGCGACTATG GCGGCATCGA CCATGCCTTC CTCAACGCCG GCATGCTCCA GCCCTATATC
CCGTTCGAGC AGGTGACGAC GGCGCTGTTC GACAGGCTGA TCGCGGTCAA CCTGCGCGGC
GCCTTCCTGG GGCTGCAACT CGCGCTCGCG CGGCTGCGGC CGGGCGGGGC CTGCGTCGTC
ACCGCCTCGG CGGCCGGCCT GATCGGCTTC TCCGAGGCGG CGGCCTATGC CACGTCGAAG
CACGGCCTGG TCGGGCTGGT CCGCTCGGCG GCGCGCGCCT TCGCCGACAA GGGGCTGCGC
GTGAACGCGG TCTGCCCCGG CATGGTGCTG ACCCCGATGA ACGGGATCGC GCAGGACGAC
GCGCTCGCCG AGGAGCTGTC GCATCCCGGC TATCGCGGCG GCCTTTCGGC GCAGCATATC
GCCGAGGTCG CGCTGTTCCT GATGTCGAAC CGCGCCGCGG GGGTCAACGG ACAGGCGCAG
CTCGTCGATT CGGCCCTGCT GTCGTCCTTC CCGCCGCTCG ATCTCTAG
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| Protein sequence | MSGGSFEGQV ALVTGGGSGI GRAAARRFAA EGAAVVVADL NGEGAAATAA LIREAGGRAT
AVTADVASEA DNQAMFDAAE RDYGGIDHAF LNAGMLQPYI PFEQVTTALF DRLIAVNLRG
AFLGLQLALA RLRPGGACVV TASAAGLIGF SEAAAYATSK HGLVGLVRSA ARAFADKGLR
VNAVCPGMVL TPMNGIAQDD ALAEELSHPG YRGGLSAQHI AEVALFLMSN RAAGVNGQAQ
LVDSALLSSF PPLDL
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