| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3345 |
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| Symbol | |
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| ID | 5196702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3676260 |
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| End bp | 3678026 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582890 |
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| Product | amidohydrolase 3 |
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| Protein accession | YP_001263829 |
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| Protein GI | 148556247 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3653] N-acyl-D-aspartate/D-glutamate deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.783036 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTTGATT TTATCGGTAC AATATGTACC TTTTATCCAT GGCGACCGCG GGGACTCGCG
GCGCCGTGGG AGAAGATGCC GATGCTCGAC CTGGTGATTC GCAATGGACT CGTTTGCGAC
GGCAGCGGCG CGCCCGCCTA TCGCGGCAGC GTCGGCATCC GCGACGGGCG GATCGTCGCG
ATCGGGGAGG TCGACGGCCT CGCCCGCCAG ATCGTCGACG CCGGCGGCCT CGTCATCGCG
CCCGGCTTCA TCGATCCGCA CACCCATTAT GACGCGCAGC TCGTCTGGGA CGGGCAGGCG
CAGCCGTCGC TCGAACATGG CGTGACGACG GTGGTGCCGG GCAACTGCTC GCTCAGCCTG
GCACCGCTCC GGGCCGAGCA TCGCGAGCTG CTCGGCGCCA CGTTCCGCAA GATCGAGGAG
ATGCCGAAGA ACGCCTTCGA CGCCGGGCTG AGCTGGGAAT GGGAGAGCTT CGCCGATTAT
CTGGCGACGA TCCGCCCGAC CCTCGGCGTC AACGTCGCGC CGCTCGTCGG GCACAGCCTG
TTGCGGCTGT GGGTGATGGG CCTCGACGCG CGCGAGCGGG CCGCGACCGA TGCCGAGATC
GCCGCGATGC AGGCGCTGCT CGGCGAATGC CTCGATGCCG GGGCGGTGGG GATGAGCGGG
TCGTGGGTCG ACATCGACCA TGAGAACCGC CCGGTGCCGG CGCGGCTGGC CGAGCCGCGC
GAGCTCGACG CGCTCTGCGC CACGCTCGGC GAAAAGGGCG GCATCCTCCA GATCGTGCCC
GAATTCTGGG ACGCCGACCT GCTCTGCGCG CGGATCGACC TGCTCGCCGG CCTGTCGCGC
AAGCACGGCA TCCGCACCAC CTTCTCGCCG CTGTTCGACA GCAACGCCGC GCCCGAGCTG
GTCGGCATCG CGCTCGACCG CGTCCGGCTG CAGACCGCGC ATGGCGCGAC GGTGGTGCCG
CAGATGCAGA CCCGGCCGAT CGACCTGTCG TTCGACCTGA CCGCGCCGAT GTCGACCTTC
GCGACGCTGC CCGGCTGGTG GGCGATGACG CTGCTGCCGC GCGCGGAGAA GCTGGCGTTG
CTCCGCGATC CCGAGCGCCG CCGCGCGCTG GCGGCGGAGA TGGACGATTT CTTCATGCCG
ATCGGCCTGC AGATCGACTT CGCCGATGCC TATGTGAAGC GGATGGGCAC GCCCGACGGC
GCGCTGATGG GCCGGCGCGT GGGCGACCTC GCCGCCGAGC GCGGCTGCCA CATCGCCGAG
GCGATCATCG ACATCGCCCT GGCCGACGAC CTCGCCACCT CGTTCGGGCT CGACGCGATC
GGCCATGACG ACGCGGCGAA GATCGCGACG ATGCTCGCCG ATCCGCTGGT CGGGATCGGC
GCGGGCGACG GCGGCGCGCA TGTCACCAAT TTCGCGACCT ATGGCGACAC CGGCTATCTG
TTCAGCCGCT ATGTGCGCGG GTTCGGCGCG ATGCCGCTGG AGACCGCGGT GCGCAAGCTG
ACCCACGACG TCGCCCGGCT GTGGGGCCTG GACAAGCGCG GCCTGCTGCG GCCCGGCTAT
GCCGCCGACA TCGTCCTGTT CGATCCCGAG CGGATCGACC GGGGGCCGGA GATACCGGTC
GAGGACCTGC CGGCGGACGG CTTCCGCTAC ATCCGGCGGG CGAGCGGGAT CGAGCGCGTC
TTCGTCAATG GCGCGCTCGC CTATAGCCGC GACGGTGGCT ATGCGGCCGC GCGCGCCGGC
ACGGTCGCGG AAAGGGTCGC GGCATGA
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| Protein sequence | MLDFIGTICT FYPWRPRGLA APWEKMPMLD LVIRNGLVCD GSGAPAYRGS VGIRDGRIVA
IGEVDGLARQ IVDAGGLVIA PGFIDPHTHY DAQLVWDGQA QPSLEHGVTT VVPGNCSLSL
APLRAEHREL LGATFRKIEE MPKNAFDAGL SWEWESFADY LATIRPTLGV NVAPLVGHSL
LRLWVMGLDA RERAATDAEI AAMQALLGEC LDAGAVGMSG SWVDIDHENR PVPARLAEPR
ELDALCATLG EKGGILQIVP EFWDADLLCA RIDLLAGLSR KHGIRTTFSP LFDSNAAPEL
VGIALDRVRL QTAHGATVVP QMQTRPIDLS FDLTAPMSTF ATLPGWWAMT LLPRAEKLAL
LRDPERRRAL AAEMDDFFMP IGLQIDFADA YVKRMGTPDG ALMGRRVGDL AAERGCHIAE
AIIDIALADD LATSFGLDAI GHDDAAKIAT MLADPLVGIG AGDGGAHVTN FATYGDTGYL
FSRYVRGFGA MPLETAVRKL THDVARLWGL DKRGLLRPGY AADIVLFDPE RIDRGPEIPV
EDLPADGFRY IRRASGIERV FVNGALAYSR DGGYAAARAG TVAERVAA
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