Gene Swit_3343 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3343 
Symbol 
ID5201027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3674859 
End bp3675593 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content74% 
IMG OID640582888 
Productinositol monophosphatase 
Protein accessionYP_001263827 
Protein GI148556245 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.685113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG GCGAACTCGC CGCCCATCTC GCCGATTTCG CCGGGCGCCT GCTGCTCGAC 
GTGCGCGCGA GCGGGATGTT CCCGGCCAAG GCGCTGGGCA AGGCGGGCGA CCAGACCGCC
AACCAGTTCC TGTGCCACGC GCTCCGCGCG CAGCGCCCCG ACGACGGGTT GCTGTCCGAG
GAGGAGAAGG ACGATGCCGA GCGGCTGTCC AAGGGGCGCG TCTGGATCGT CGATCCGGTC
GACGGCACCC GCGAATATGG CGAGGAGCGG GCCGACTGGG CGGTCCATGT CGGGCTTGCG
ATCGACGGCG TCGCGACGGT CGGCGCGGTG GCGCTGCCGG GGCTGGGCGT GGTGCTGCGG
TCGGACCGGC CGCAGCCGCT GCCGCCCGCC AACCAGCCGC TCCGCATGCT CGTCAGCCGC
ACCCGGCCGG CGGCGGAGGC GGTCGCGGTC GCCGGACGGC TGGGCGCCGA GCTGCTGCCG
ATGGGATCGG CCGGCGCCAA GGCGATGGCG GTGGTGCGCG GCGAGGCCGA CATCTACCTC
CACACCGGCG GCCAATATGA ATGGGACAGC TGCGCCCCCG TCGCGGTCGC GGCGGCGCAC
GGCCTGTTCT GCTCGCGGGT CGACGGATCG CCGCTGCGCT ACAACCAGCC CGACGTGTAC
CTGCCTGACC TGATCATCTG CCGGCCCGAG CTGGCCGACG CGGTGCTGGC GGCGGCGCGC
GCCGAAGCCG CCTGA
 
Protein sequence
MTDGELAAHL ADFAGRLLLD VRASGMFPAK ALGKAGDQTA NQFLCHALRA QRPDDGLLSE 
EEKDDAERLS KGRVWIVDPV DGTREYGEER ADWAVHVGLA IDGVATVGAV ALPGLGVVLR
SDRPQPLPPA NQPLRMLVSR TRPAAEAVAV AGRLGAELLP MGSAGAKAMA VVRGEADIYL
HTGGQYEWDS CAPVAVAAAH GLFCSRVDGS PLRYNQPDVY LPDLIICRPE LADAVLAAAR
AEAA