Gene Swit_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3339 
Symbol 
ID5199895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3669400 
End bp3670866 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content71% 
IMG OID640582884 
Producthypothetical protein 
Protein accessionYP_001263823 
Protein GI148556241 
COG category[C] Energy production and conversion 
COG ID[COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.196154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGTT ATTCACTTCA TCGTCCGCTG CCCGTCGGGG AGGTCCCCGG CTGGGACATC 
GAGACCGGCG TGGCGGTGAT CGGCTTCGGC GCGGCCGGCG CCTGCGCGGC GCTGGAGGCG
GCGCGGGGCG GGGCGCGCAC CACCCTGTTC GAGATGGGAT CGGGCAGCGG CGGCGCCTCC
GCGCTGTCGG GCGGCGAGAT CTATATCGGC GGCGGCAGCG ATGCGCAGCG GGCGGCAGGC
TTCGCCGACA CGCCCGAGGC GCTGGCCGCC TATCTGAAGC TGGCCGGCGG GCCCGACGCG
GACGCCGCCA AATGCGATCT CTACGCGGCG CAGAGCCTCG ACCATTATGC ATGGCTGAAG
GCGCAGGGCG TCCCCTACAA GGGCAGCTTC GTGCCCGGCA AGATCATCGA GCCGGCGACC
GACGACACGC TGATCTGGTC GGGCAGCGAG GAGGCCTGGC CCTTCTGCGA GACCGCGGCC
CCCGCGCCGC GCGGCCATGT CATCCAGTTC GAGGGCTGGG GCGGCGGGCG CCTGCTGGTC
GACATCCTCG AGCGCAACGT GCGCGCGGCC GGCGTCGACG TGCGGACCGA CGCGCGCGTC
GTCGCGCTGA TCGCGGACGG CCCGGCGATC GTCGGACTGG TCGTCCGCAT CGACAATCGC
GACCATTTCG TCCGCGCGGG CGCGACGGTG ATCTGCACCG GCGGCTTCTG CATGAACCAG
GACATGATCC GCCGCTACGC GCCCGAGGCG CTCAAGCTCA GCGATCCGAT CGGCGAGAAC
GACAACGGAT CGGGCATATT GATGGGGATG GGCGCCGGCG GCGACGCGAT CCACATGGAC
GAGTTCTTCA CGACCTGTCC GTGGATCATG CCCGAAAGCC TGGTGAAGGG CATCTTCGTC
AACCGCAACG GGCAGCGCTT CATCAACGAG GATTGCTATC ACGGCCGGGT CAGCCGGACG
ATGATCGACC AGCCCGGCGA CCGGGTCTGG CTGCTCGTCG ACACTGCGAT CTTCGCGCGG
CCGATCGACC TGGCGCGGAT CGACATCGCC GCGGTGGGCG AGAGCTGGGA GGAGGTGGAG
CGCGAGCTCG GCCTGCCCGA GGACACGCTG AGCGCCACCG TCCGCACCTT CAACCGCTAC
GCCGCCGAGG GCGAGGACCC GCTGTGGCAC AAGGCGGCCA AATGGCTGAA GGTGCTCGAC
GAGCCGCCCT TCGCCGCGCT CGAACTCAAT TTCGCCGGCA GCTATTTCTC CTTCTTCACC
CTCGGCGGGC TCGCGACCCT GCCGACCGGC GAGGTGCTCG ACCGCGCCGG CGCGCCGGTG
CCGGGCCTGT TCGCGGCCGG GCGGGCGACC GCCGGCCTGC CGCGCTGGGG CCATGGCTAC
AGCTCGGGCA TGAGCCTTGC CGACTGCACC TTCTTCGGGC GCCAGGCGGG GATGGCGGCG
GCGCGGGCGC TCACGCCAGC AGCGTGA
 
Protein sequence
MAGYSLHRPL PVGEVPGWDI ETGVAVIGFG AAGACAALEA ARGGARTTLF EMGSGSGGAS 
ALSGGEIYIG GGSDAQRAAG FADTPEALAA YLKLAGGPDA DAAKCDLYAA QSLDHYAWLK
AQGVPYKGSF VPGKIIEPAT DDTLIWSGSE EAWPFCETAA PAPRGHVIQF EGWGGGRLLV
DILERNVRAA GVDVRTDARV VALIADGPAI VGLVVRIDNR DHFVRAGATV ICTGGFCMNQ
DMIRRYAPEA LKLSDPIGEN DNGSGILMGM GAGGDAIHMD EFFTTCPWIM PESLVKGIFV
NRNGQRFINE DCYHGRVSRT MIDQPGDRVW LLVDTAIFAR PIDLARIDIA AVGESWEEVE
RELGLPEDTL SATVRTFNRY AAEGEDPLWH KAAKWLKVLD EPPFAALELN FAGSYFSFFT
LGGLATLPTG EVLDRAGAPV PGLFAAGRAT AGLPRWGHGY SSGMSLADCT FFGRQAGMAA
ARALTPAA