Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3339 |
Symbol | |
ID | 5199895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3669400 |
End bp | 3670866 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582884 |
Product | hypothetical protein |
Protein accession | YP_001263823 |
Protein GI | 148556241 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.196154 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGGTT ATTCACTTCA TCGTCCGCTG CCCGTCGGGG AGGTCCCCGG CTGGGACATC GAGACCGGCG TGGCGGTGAT CGGCTTCGGC GCGGCCGGCG CCTGCGCGGC GCTGGAGGCG GCGCGGGGCG GGGCGCGCAC CACCCTGTTC GAGATGGGAT CGGGCAGCGG CGGCGCCTCC GCGCTGTCGG GCGGCGAGAT CTATATCGGC GGCGGCAGCG ATGCGCAGCG GGCGGCAGGC TTCGCCGACA CGCCCGAGGC GCTGGCCGCC TATCTGAAGC TGGCCGGCGG GCCCGACGCG GACGCCGCCA AATGCGATCT CTACGCGGCG CAGAGCCTCG ACCATTATGC ATGGCTGAAG GCGCAGGGCG TCCCCTACAA GGGCAGCTTC GTGCCCGGCA AGATCATCGA GCCGGCGACC GACGACACGC TGATCTGGTC GGGCAGCGAG GAGGCCTGGC CCTTCTGCGA GACCGCGGCC CCCGCGCCGC GCGGCCATGT CATCCAGTTC GAGGGCTGGG GCGGCGGGCG CCTGCTGGTC GACATCCTCG AGCGCAACGT GCGCGCGGCC GGCGTCGACG TGCGGACCGA CGCGCGCGTC GTCGCGCTGA TCGCGGACGG CCCGGCGATC GTCGGACTGG TCGTCCGCAT CGACAATCGC GACCATTTCG TCCGCGCGGG CGCGACGGTG ATCTGCACCG GCGGCTTCTG CATGAACCAG GACATGATCC GCCGCTACGC GCCCGAGGCG CTCAAGCTCA GCGATCCGAT CGGCGAGAAC GACAACGGAT CGGGCATATT GATGGGGATG GGCGCCGGCG GCGACGCGAT CCACATGGAC GAGTTCTTCA CGACCTGTCC GTGGATCATG CCCGAAAGCC TGGTGAAGGG CATCTTCGTC AACCGCAACG GGCAGCGCTT CATCAACGAG GATTGCTATC ACGGCCGGGT CAGCCGGACG ATGATCGACC AGCCCGGCGA CCGGGTCTGG CTGCTCGTCG ACACTGCGAT CTTCGCGCGG CCGATCGACC TGGCGCGGAT CGACATCGCC GCGGTGGGCG AGAGCTGGGA GGAGGTGGAG CGCGAGCTCG GCCTGCCCGA GGACACGCTG AGCGCCACCG TCCGCACCTT CAACCGCTAC GCCGCCGAGG GCGAGGACCC GCTGTGGCAC AAGGCGGCCA AATGGCTGAA GGTGCTCGAC GAGCCGCCCT TCGCCGCGCT CGAACTCAAT TTCGCCGGCA GCTATTTCTC CTTCTTCACC CTCGGCGGGC TCGCGACCCT GCCGACCGGC GAGGTGCTCG ACCGCGCCGG CGCGCCGGTG CCGGGCCTGT TCGCGGCCGG GCGGGCGACC GCCGGCCTGC CGCGCTGGGG CCATGGCTAC AGCTCGGGCA TGAGCCTTGC CGACTGCACC TTCTTCGGGC GCCAGGCGGG GATGGCGGCG GCGCGGGCGC TCACGCCAGC AGCGTGA
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Protein sequence | MAGYSLHRPL PVGEVPGWDI ETGVAVIGFG AAGACAALEA ARGGARTTLF EMGSGSGGAS ALSGGEIYIG GGSDAQRAAG FADTPEALAA YLKLAGGPDA DAAKCDLYAA QSLDHYAWLK AQGVPYKGSF VPGKIIEPAT DDTLIWSGSE EAWPFCETAA PAPRGHVIQF EGWGGGRLLV DILERNVRAA GVDVRTDARV VALIADGPAI VGLVVRIDNR DHFVRAGATV ICTGGFCMNQ DMIRRYAPEA LKLSDPIGEN DNGSGILMGM GAGGDAIHMD EFFTTCPWIM PESLVKGIFV NRNGQRFINE DCYHGRVSRT MIDQPGDRVW LLVDTAIFAR PIDLARIDIA AVGESWEEVE RELGLPEDTL SATVRTFNRY AAEGEDPLWH KAAKWLKVLD EPPFAALELN FAGSYFSFFT LGGLATLPTG EVLDRAGAPV PGLFAAGRAT AGLPRWGHGY SSGMSLADCT FFGRQAGMAA ARALTPAA
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