Gene Swit_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3323 
Symbol 
ID5197648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3655537 
End bp3656691 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content75% 
IMG OID640582868 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001263807 
Protein GI148556225 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.105187 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000875801 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAGCGAC TCCATGGACA GTGCGCAGCC GGACCGCGCG CGGCGCTGTT CGTGCCCTTC 
GTCTCGCGCG CGCTGACGCT GCCCAACCGC ATCGTCATGT CGCCGATGGG GCGCGCCCAT
GCCGAAGCGG GCCGGCCGCA CGCCGATTAC GGCGCCTATT TCCGGCGGCG GATCGAGGGC
GGCGTCGGAC TGGCGATCAC CGGCGCGGCG GCGGTGGCGC ACGACCTGGC CGACTATGAC
GGCACCGGCC CGCATTTCCA CGGCGAGGAC GCGCTGGCCG GCTGGCGCGC CGTGCTGGAG
GAGGTCCACA TGGCCGGCGG CCGGCTGATC CCGCAGCTCT GGCACACCGG CATGGCGCGT
CATGTCGCGG CGTTCGGGGG CGGGGCGGCG ATCGGCCCGT CGGGCTATGC GATCGCCGAT
CTCGACGCCG GCCGGGGCCC GAGCGGGCGG GCGATGACCG AGGCGGACAT GGACGCGGTC
GTCGCGGCCT TCGCCGGATC GGCGGCGGCG GCGCGGGCGC AGGGCTTCGA CGGGATCGAG
GTCCATGCCG GCCATGGCTT CCTGCTCGAC CAGTTCCTCT GGCCGGCGAC CAACCGGCGC
ACCGACGACC ATGGCGGATC GCCGGCCAAC CGGGCGCGCT TTCCGGCCCG CGTGGTGGCG
GCGTGCCGCG CGGCTGTCGG CCCCGATGTC CCGATCCTGC TGCGCCTGTC GCAGTTCAAG
ATCGACGCCT ATGGCGCGCG CATCGCCGAT ACGCCGGACG AGCTCGGCGC GCTGCTGGCG
CCGCTGGTCG AGGCGGGCGT CGACATCCTC CACTGCTCGC AGCGCGAGGC GTGGGAGCCG
GCTTTCGCCG GCAGCGACCG CAACCTCGCC GCCTGGGCGA AGGCGCTGAC CGGCCTGCCG
ACGATCGCGG TGGGCTCGAT CGGCCTGGCT GGCCTGTTCA CCGAGGAGGA GGCGGCGACG
CCCGGCGCGG GCCTGCCCGG CGTGTCGCTG GCGCGGCTCG ACCAGGTGGC GGAGCAATTG
GCGCGCGGTG ACTTCGACCT GCTGGCGGTC GGCCGCTCGC TGCTCGCCGA TCCGGCCTGG
CCGAACAAGG TGCGCGAAGG CCGGGAGGCG AGCCTGCGGC CGCTCGACTT CGCGGCGCTG
ACCCAATTGC GGTGA
 
Protein sequence
MKRLHGQCAA GPRAALFVPF VSRALTLPNR IVMSPMGRAH AEAGRPHADY GAYFRRRIEG 
GVGLAITGAA AVAHDLADYD GTGPHFHGED ALAGWRAVLE EVHMAGGRLI PQLWHTGMAR
HVAAFGGGAA IGPSGYAIAD LDAGRGPSGR AMTEADMDAV VAAFAGSAAA ARAQGFDGIE
VHAGHGFLLD QFLWPATNRR TDDHGGSPAN RARFPARVVA ACRAAVGPDV PILLRLSQFK
IDAYGARIAD TPDELGALLA PLVEAGVDIL HCSQREAWEP AFAGSDRNLA AWAKALTGLP
TIAVGSIGLA GLFTEEEAAT PGAGLPGVSL ARLDQVAEQL ARGDFDLLAV GRSLLADPAW
PNKVREGREA SLRPLDFAAL TQLR