| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3297 |
|---|
| Symbol | |
|---|
| ID | 5196266 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3625707 |
|---|
| End bp | 3626588 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640582842 |
|---|
| Product | coenzyme A transferase |
|---|
| Protein accession | YP_001263781 |
|---|
| Protein GI | 148556199 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1788] Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0965913 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACAT TGGACAAGCG CACCACCGCC GAGGCGGTGG TCGGCCGCCT GCGCGACGGG
ATGACGATCG GCATCGGCGG CTGGGGCCCG CGGCGCAAGC CGATGGCGCT GGTCCGCGCG
CTGCTGCGCA GCGACGTCAA GGACCTGACC GTCGTCGCCT ATGGCGGGCC CGAGGTCGGC
ATGCTGCTGG CGGCGGGCAA GGTGCGCAAG CTGATCTACG GCTTCGTCTC GCTCGACGCG
ATCCCGCTGG AACCCTATTT CCGCAAGGCG CGCGAGGCCG GCGGCCTCGA GGTGCTGGAG
CTCGACGAGG GCATGCTGCA ATGGGGGTTG AAGGCCGCCG CGCTGCGCCT GCCCTTCCTG
CCGACCCGCG TCGGCCTGGG CACCGACGTG TTCGACCAGG GCGGCTTCCG CACCGTGACC
TCGCCCTATG ACGACGGCGA GGTGCTGCTG GCGATGCCGG CGGTGCCGCT CGACCTCGCG
CTGATCCACG TCCACCGCGC CGACCGGATG GGCAACATCC AGGCGCTCGG CCCCGACACC
TATTATGACG AATGGTTCGC CAAGGCGGCG AAGGAGGTCG TCGTGTCGGC CGAGGAGGTG
GTCGACCGGC TCGACCTCAG CCATCCCGAG GACGCCAGGG CCAACATCGT CGAGCGCTGC
TTCGTGCAGC ATGTCGTCGA GGCGCGGCAC GGCGCCCACC CCACGTCGAT GCCGCCCGCC
TATGGCTGGG ACATGCCCGC GCTCAAGGCC TATGTCGCCA GCGCCGGCGA GGCGGACGGC
TGGGCGCGCT ACCGGACCGA CATGATCGGC CCCGACGAGG CGCATTATCT GGCGCAGGCG
GGCGGCGACG CCATCGCCGA GCTGCCGCTC CCGATTTTCT GA
|
|---|
| Protein sequence | MTTLDKRTTA EAVVGRLRDG MTIGIGGWGP RRKPMALVRA LLRSDVKDLT VVAYGGPEVG
MLLAAGKVRK LIYGFVSLDA IPLEPYFRKA REAGGLEVLE LDEGMLQWGL KAAALRLPFL
PTRVGLGTDV FDQGGFRTVT SPYDDGEVLL AMPAVPLDLA LIHVHRADRM GNIQALGPDT
YYDEWFAKAA KEVVVSAEEV VDRLDLSHPE DARANIVERC FVQHVVEARH GAHPTSMPPA
YGWDMPALKA YVASAGEADG WARYRTDMIG PDEAHYLAQA GGDAIAELPL PIF
|
|---|
| |