Gene Swit_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3290 
Symbol 
ID5198544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3620032 
End bp3621273 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID640582835 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_001263774 
Protein GI148556192 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.207789 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATCG CCTTCACCCC CGTGACGGTC GGCCCCGTCA CCCTGCCCAA CCGCTTCATC 
CGCTCGGGCG CGAACGAGAT GATGACGCTG CGCTCGATCC CGACCCGGTC GCTGCTCGAA
TTCCACCGCC GGCTGGCGGC GGGGGGCGTC GGCATGACCA CGCTCGCCTA TATCGCGGTG
TCGCCCGACG GGCGGACCTT CGCCGGGCAG GGCGTGCTCG ACGCCGCGAG CGTGCCGCAT
TATCGCGCGA TCGCCGACGC GGTGCATGCG GAGGGCGCGC TGATCTCCGC GCAGATCACC
CATGGCGGCA GCTTCGTCCA GCACAAGGAG CTGTCGACCC CGCGCGCCAT GTCCTCGTCG
GGCGGCATCG ACAAGATGGG CGTGCTGATG GGCCGCTTCT TCCAGCGACG GATGACCCGC
GCCGACATGG ACATGGTCCG CGACGAGTTC GTCGCCGCGG CGCGGCTGGC GGTCGAGGCC
GGGTTCGACG CGGTCGAACT GCACATGGGC CACGGCTATC TGCTCAACCA GTTCATCTCG
CCGCTCTCGA ACAAGCGGCG CGACGCCTAT GGCGGCAATG CCGGGAAGCG GGTGCGCTTC
CCGGCCGAGG TGCTGGCGGC GGTCAAGCGC GCGGTCGGCG ACCGGATCGC GGTGCTCGCC
AAGATCAACC TCTATGACGG CGCCAAGGGC GGCGCCACGG TCGAGGACGG CATCGTCACC
GCCCGCGCGC TGGAGGCGGC CGGGGCCGAC ATGCTGGTGC TGTCGGGCGG GCGCAACATC
GAATCGAGCT ACGTCATGTT CTCGAGCCCG CTGCCCTATG ACGACCTCGC GAAGATGCAG
GGCGGCTGGC TCGCCAAGCT TCAGTTCAAG CTGCTCAAGA TGGCGACGCC GAAGACGGTC
CGCTTCTCCG AGCTCTATTT CCTCGATGCC GCGCGGCGGG TGCGCGCGGC GGTCGGGTGC
CGGCTCGGCT ATCTCGGCGG GGTGCTGTCG CTGCCGGCGG CCGAGCAGGC GCTGAACGAG
GGCTTCGACG CGGTCGTCAT GGCGCGCGCG CTGGTCCATG ATCCGGCGCT GGTCGCGAAG
TGGCGCGCCG ACCCTGCCCA TCGCTCGGCC TGCAACGCCT GCAACCGCTG CGTCGCGGCG
ATGTACGGCG GCGCGGGCAC CTATTGCACC GAGACGGGCA ACGCCATCGA TATCAGGCTC
AACGGCCTCC ATGCAGGAGA GGAATGGACG GATGCTGCTT AA
 
Protein sequence
MSIAFTPVTV GPVTLPNRFI RSGANEMMTL RSIPTRSLLE FHRRLAAGGV GMTTLAYIAV 
SPDGRTFAGQ GVLDAASVPH YRAIADAVHA EGALISAQIT HGGSFVQHKE LSTPRAMSSS
GGIDKMGVLM GRFFQRRMTR ADMDMVRDEF VAAARLAVEA GFDAVELHMG HGYLLNQFIS
PLSNKRRDAY GGNAGKRVRF PAEVLAAVKR AVGDRIAVLA KINLYDGAKG GATVEDGIVT
ARALEAAGAD MLVLSGGRNI ESSYVMFSSP LPYDDLAKMQ GGWLAKLQFK LLKMATPKTV
RFSELYFLDA ARRVRAAVGC RLGYLGGVLS LPAAEQALNE GFDAVVMARA LVHDPALVAK
WRADPAHRSA CNACNRCVAA MYGGAGTYCT ETGNAIDIRL NGLHAGEEWT DAA