| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3284 |
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| Symbol | |
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| ID | 5197860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3615089 |
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| End bp | 3615889 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582829 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263768 |
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| Protein GI | 148556186 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.197141 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCCGTC CGCTCGCCGG CAAGCGCGCG CTGGTCACCG GGTCGAGCGC GGGGCTGGGC
GAGGGCATCG CGCTCCGCCT CGCCCAGGAC GGCGCCGCCG TCTGCCTGCA CGGCCGCAAC
GAAACGCGGC TCGCGGCGGC GCGGGATCGG GTCGCCGAGG CCGGCGGCGC CGTCCATGCG
GTGGCCGGCA CCCTGTCCGA CGATGCCGGC GCCCGGGCGG TGTTCGACGG CGCGGTCGCG
GCGCTCGGCG GGATCGACAT CCTCGTCAAC AATGCCGGCG GCGAATCGGC GGGCGGCGGC
ACCACCCCCT GGCTCGACGC CGACGCCGAC ACCTGGAACG CGACCTACAA CTCCAATGTC
GGCTCGATCG TCCGGCTGGT CCGGCTGGCG GCGCCGGGGA TGCGCGAGGC GGGCTGGGGC
CGGCTGATCC AGCTGTCGAG CGAATCGGCC GATTTCCCGA TGGCGATCAT CCCCGACTAT
CAGGCGTCGA AGCTCGCGAT CCGATCGCTG ACCCGCAGCC TCGCCATGGC GCTGGCGCGG
ACCGGCATCA CCGCCAACAG CATCAGCCCC GGCCTCACCC ATTCGACCGG CCCCGATCGC
TGGCTCAAGC AGATGGCCCA GGCGAACGGC TGGGAAGAGG ACTGGGATTC GATCACCCGC
CACGTCCAGG ACGGGATGAT CGCGAACCAT GCCGGCCGGA TCGGCGATCC CGCCGACATC
GCCCATGCCG TCGCCTTCCT CGCCGATCCG CGCGCGGGCT TCGTCAACGG CATCGACATC
CCGGTCAACG GCGGCCGCTG A
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| Protein sequence | MSRPLAGKRA LVTGSSAGLG EGIALRLAQD GAAVCLHGRN ETRLAAARDR VAEAGGAVHA
VAGTLSDDAG ARAVFDGAVA ALGGIDILVN NAGGESAGGG TTPWLDADAD TWNATYNSNV
GSIVRLVRLA APGMREAGWG RLIQLSSESA DFPMAIIPDY QASKLAIRSL TRSLAMALAR
TGITANSISP GLTHSTGPDR WLKQMAQANG WEEDWDSITR HVQDGMIANH AGRIGDPADI
AHAVAFLADP RAGFVNGIDI PVNGGR
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