| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3282 |
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| Symbol | |
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| ID | 5197858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3613390 |
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| End bp | 3614160 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640582827 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001263766 |
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| Protein GI | 148556184 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.519882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAGG CAATGGCGGG CAAGGTGGTG ATCGTGACCG GCGGCAGCGA CGGTATCGGC
CGGGCGACGG CGGTCGAACT GGCGCGCGAA GGCGCGCATG TCGTGATCTG CGCGCGGCGG
CGGGAGGTGC TGGCGGAGGC GCACCAGGCG GTCGCCGCGG CCGGATCGGT CGAATCGCAC
ATCCTCGACG TCGGCGACGC GTCCGGTTTC GCGGCCTTCA TCGCCGGCAT CGCGACTCGC
CACGGCCGGC TCGACGGGCT GGTCAACAAT GCGATGGCGG TCAGCTACAA GATGATCGCC
GACCTCACCC TCGACGACTG GCGGCACGAT TTCCGCGTCA ATGCGGAGGC CGTGTTCATC
GGCACCCAGG CGGCGATGCG GGTGATGATC CCGCAGGGGT CGGGGGCGAT CGTCAACATC
TCCTCGCTCA ACGGGCTGCG CGCGATGCCG GCGATGGCCA GCTATTCGGC GTCGAAGGCG
GCGCTGGTCC ATTTCAGCGC GGTCGCCGCG GCGGAGGCCG CGCCGCACGG CGTCCGCGTC
AACGTCGTCG CGCCGGGCCA GATCATGACC CCGGCGACCG AAGCCTTCGC CGCCGCCGAT
CCCGAGCGCA ACGCGCGCGT CTCGGGCGCC ATCCCGATGG GGCGCGGCGG CCGGCCGGAG
GAGATCGCGC ATGCGGTGCG CTTCCTGCTG TCGGACGACG CCTCCTTCAT CACCGGGGTC
TGCCTGCCCG TCGACGGCGG CAAGTTGCAG CAGCTCTACG TCCCGGCCTG A
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| Protein sequence | MAQAMAGKVV IVTGGSDGIG RATAVELARE GAHVVICARR REVLAEAHQA VAAAGSVESH
ILDVGDASGF AAFIAGIATR HGRLDGLVNN AMAVSYKMIA DLTLDDWRHD FRVNAEAVFI
GTQAAMRVMI PQGSGAIVNI SSLNGLRAMP AMASYSASKA ALVHFSAVAA AEAAPHGVRV
NVVAPGQIMT PATEAFAAAD PERNARVSGA IPMGRGGRPE EIAHAVRFLL SDDASFITGV
CLPVDGGKLQ QLYVPA
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