| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3281 |
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| Symbol | |
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| ID | 5197857 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3610699 |
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| End bp | 3613092 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640582826 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_001263765 |
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| Protein GI | 148556183 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.475296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCA CCATAACCGC GCTGGCGCTG GCCGGCGTGT CCCTGTTCGC CACCACCGCT
GCCGCCCAGA CCGCCCCCGC AGCCGCCGAC TCCGAAGGGG TCAACGGCCT GCAGGAGATC
GTCGTGACCG CGCAGCGCCG CGCGGAAAGC CTGCAGAAGG TCCCCGTCGC GGTCACCGCG
ATCAGCGCCG AACAGATCGA CGACCTGCGC GTCACCAATG TGAAGAACCT CGCCGGCCTC
GCGCCGAGCC TCCAGATCCA GAACCAGGGC CTCCAGAGCA ACCCGTCGAT CGCGATCCGC
GGCGTCGCCT CGGGCGTGTC GAACAACGCG GTCGATCCCA AGGTCGGCAT CTATCTCGAC
GGCGTCTATA TCGGCCGCAC CGTCGGCTCG ATCTTCGACC TCGCCGACAT CCAGCGGGTC
GAGGTGCTGC GCGGTCCGCA GGGCACGCTG TTCGGCCGCA ACGCGACCAG CGGCGCGATC
AGCCTGGTCA GCGCCGAGCC GACCGGCGAG TTCGGCGTCC GCGCCACCGG CTCCTACGGC
AATGGCGAGG CGATCCGCGG CAAGGCGGTG ATCAACCTGC CCGCCTTCGG CCCCTTCTCG
GTCAAGCTGG CCTATCTGCA CGACCAGATC GACGGCGACT ACACCAACCT GATCGGCGGC
AAGACGATCA ACCTGGCGCT GCGCGACCCG CGCTTCGGCA CCGAGACCTT CGCGCGCAAG
CTCGGCCGCC GCAACATCGA CGGCGGACAG CTCGCCATCC GGGGCGAGTT CGGCAACCTC
ACCGCCGATT ATCGCTTCGA CTATACCGAC GCCCGCACCA CCGGCCGCGC GATCCAGAGC
CTGGGCGTGA TCCCCGATTC GTCGGGCGCG CTGCTCCAGC CGATCGTTGA CCTGCAGCCC
TTCTTCGGCG GCGTCACCAA CATCGCCCCC AACGCCCGGC TGTCCGCGGT CGCCAATGCG
ACGAGCGAGG AGCATGTCGT GACGCAGGGC CACAGCCTGA CCCTGGCGGT GAAGCCGAAC
GACCTGGTGA CGGTGAAGAG CATCACCGCC TATCGCAAGT TCAGGCAGGA CCCGAACATC
TACGACCTCG CCGCCTCGGG CGGGCTGCGC TTCACCTTCG GGCAGCTCGG CGCGCTGATC
ACCCCGGGCC TCACCCCGGC GCAGATCCAG GCGGCGCTGT TCAACCCGGC CAACATCCCC
GGGCCGAACG ACTATTTCTT CTCGCTGCTC ACCGCGCGCA AAACCAGCCA GAAGCAGTTC
AGCCAGGAGT TCCAGATCCA GCTCGACGGC GAGCATTATG AGCTGACCGC CGGCGCCTTC
TATTTCCACG AGCGCTCGCC CGCGACCGAC ATCCTCGGCA TCCTCGAACC GATCCCCGGC
GGCCTGGTGG TGCCGAGCCC GCTCGACGCG GCGTTCGGCA GCGGCGTCAC CGACACGGTG
TCGATCAACG ATTCCTGGGC GGGCTACGGC CAGCTCACCG TCCATCTCGG CGATCGCGTC
GACGTCACCG GCGGGCTTCG CTACACGATC GACGACCGCG ACCTCGCGAT CAACGCCATA
TCGGGCGGCC AGGGCGGCCA GCTCGGCGTC GGCAAGTACA ATGTCAGCTT CAAGAAGCTC
AACTATACCG GCATCCTGAC CTGGCGGCCG ACCGACCAGG CCACCGCCTA TGCCAAGATA
TCGAGCGGCT ATGTGGCGGG CGGCATCCTC AGCGGCATCC CCTACAAGCC GGAGACGCTG
GTCTCCTACG AGCTGGGCGC CAAGACGCAG ATGTTCGACA ACCGCGTCCG CCTGAACGTC
GCGGCCTTCT ACAGCGACTA CAAGGACCTG CAGACGCAGA ACTTCATCAA CGGCCGCCAG
TTCTTCGACA ATGCCGGCAA GGCGTCGATC AAGGGCTTCG AGGTCGAGGC CGACGTCATC
CCGGTGCGCG GCCTCGTGCT CAGCGGCAAT GTCGGCTACG CCGATCTCAA CTACAAGACG
TTCATCCTGA ACGGGATCGA CGTCGCCGAC GTGGCGCGCA CCACCTACAA CTCGAAATGG
ACGGCGCGGG TCGCGGCGCA ATATGACGCG CCGGAATTCG CGAACGGCAG CCATCTGCAA
GGCCGGATCG AGGGCCGCTA TCGCAGCAGC TACTATCTCA CCTCGACGCC GTTCGTGAAC
CTGACGGGCC AGGTCGTGCT GGAGAACGAG AACCGCCAGC CCGGCTACTG GCTGGTCGAC
GGGCGCTTCG GGCTGGTCGA CATCCCGATC GGCGGGACCA AGGCGTCGCT CTCGGCCTTC
GGCCAGAACC TGTTCGACAA GCAGTATATC TCGTTCGGCG CGCCGGTGCT GTCGCTGGTC
GGCAGCTATG AGCGCGGCCG CACCTATGGC GTCGAACTGG GTTTCGCCTT CTGA
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| Protein sequence | MRFTITALAL AGVSLFATTA AAQTAPAAAD SEGVNGLQEI VVTAQRRAES LQKVPVAVTA
ISAEQIDDLR VTNVKNLAGL APSLQIQNQG LQSNPSIAIR GVASGVSNNA VDPKVGIYLD
GVYIGRTVGS IFDLADIQRV EVLRGPQGTL FGRNATSGAI SLVSAEPTGE FGVRATGSYG
NGEAIRGKAV INLPAFGPFS VKLAYLHDQI DGDYTNLIGG KTINLALRDP RFGTETFARK
LGRRNIDGGQ LAIRGEFGNL TADYRFDYTD ARTTGRAIQS LGVIPDSSGA LLQPIVDLQP
FFGGVTNIAP NARLSAVANA TSEEHVVTQG HSLTLAVKPN DLVTVKSITA YRKFRQDPNI
YDLAASGGLR FTFGQLGALI TPGLTPAQIQ AALFNPANIP GPNDYFFSLL TARKTSQKQF
SQEFQIQLDG EHYELTAGAF YFHERSPATD ILGILEPIPG GLVVPSPLDA AFGSGVTDTV
SINDSWAGYG QLTVHLGDRV DVTGGLRYTI DDRDLAINAI SGGQGGQLGV GKYNVSFKKL
NYTGILTWRP TDQATAYAKI SSGYVAGGIL SGIPYKPETL VSYELGAKTQ MFDNRVRLNV
AAFYSDYKDL QTQNFINGRQ FFDNAGKASI KGFEVEADVI PVRGLVLSGN VGYADLNYKT
FILNGIDVAD VARTTYNSKW TARVAAQYDA PEFANGSHLQ GRIEGRYRSS YYLTSTPFVN
LTGQVVLENE NRQPGYWLVD GRFGLVDIPI GGTKASLSAF GQNLFDKQYI SFGAPVLSLV
GSYERGRTYG VELGFAF
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