| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3271 |
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| Symbol | |
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| ID | 5197108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3601173 |
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| End bp | 3602858 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640582816 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001263755 |
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| Protein GI | 148556173 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0753246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTGA AGGACGGGAA GGGCGAGACG CTTCCCTCGC GGACGATCAC CGACGGGCTC
GACCGCGCCC CGCACCGCGC CTTCCTGCGG GCGATGGGGC ATGACGACGT GGCGATCGGC
CAGCCCTTCG CGGGCATCGT CTCGACCGGG GCGTCGGTGA CGCCCTGCTC GATGTCGCTG
GCGCCTCAGG CCGAGGCGGC GAAGGCCGGG CTCCAGGCGG CGGGGGTGAC GCCGTTCGAA
TTCTCGACGA TCACCGTCGC CGACAGCATG TCGATGAACC ATGCCGGGAT GCGTTTCAGC
CTGGTCTCGC GGGAGATCAT CGCCGATTCG ATCGAGGCGG TGACGCGGGC GCATGGCTAT
GACGGGCTGA TCGGCTTCGC GGCCTGCGAC AAGACGTTGC CGGGCACGAT GATGGGGATG
ATCCGGGTCA ACCGCCCGTC GGTGTTCGTC TATGGCGGCG CGGCGCTGCC CGGCCGCTGG
CAGGGGCGCG ACATCGGCAT CGTCGACGTC TATGAGGGCG TCGGCCGGGT CTATGCCGGC
GAGATGGACG AGGCCGAGCT GACGCGCCTC GAAAAGGCGG GGGTGCCGAC CGTCGGCTCC
TGCGCCGGGC AGTTCACCGC CAACACCATG GCGATGGTCG CCGAGACGCT GGGCCTGGCG
CTGCCGCGCA GCGCGATGAT GCCGGCGGTG GCGAGCGAGC GCCGCGCGCT GGCCGAGGAA
TCGGGCCGCG TGCTCGGCCG GCTGATCCGC GAGGGCGGCC CGCGCCCGCG CGACCTCGTC
ACCCGTCGCA GCCTCGAAAA CGCCGCCGCC ACCGTTGCCG CCACCGGCGG CTCGACCAAC
GCCGCGCTGC ACCTGCCGGC GATCGCACAT GAGGCAGGCA TATCCTTCAC CATGGAGGAC
ATCGCCGCGA TCTTCGACCG CACCCCGCTG CTCGCCGACC TCAAGCCCGG CGGCCGCTTC
TGGGCGCGCG ACCTGCACGA GGTCGGCGGC GTGCCGACCG TGCTGCGGGC GATGCTGGAG
GCGGGCGTGC TGCACGGCGA CTGCCCGACC ATCACCGGCC GGACGATCGG CGAGATCGCC
GCCGCCGCGC CCGCGCCGGA CGGGGAGGTG GTGCGCCCCG CCGACCGGCC GATCGCGCCG
ACCGGCGGGG TGATCGTGCT GCGCGGCAGC CTCGCCCCCG ACGGCGCGAT GCTCAAGGTC
GCCGGGCTCA AGCGCCTGTC GCACGAAGGG CCGGCGCGGG TGTTCGACGG CGAGGAGGCG
GCGGTCGACG CGGTCCGCCG GCAGGATTAC CAGCCGGGCG ACGTCATCGT CATCCGTGGC
GAGGGGCCGA AGGGCGGCCC CGGCATGCGT GAGATGCTGG GCGTCACCGC GCTGATCTAC
GGCCAGGGCA TGGGCGAACA GGTCGCGCTG CTCACCGACG GCCGCTTCTC GGGCGCGACG
CGCGGCATGT GCATCGGCCA TGTCGGCCCG GAGGCCTCGG CCGGCGGCCC GCTCGCGCTG
GTCCGGGACG GCGATCGCAT CCGCATCGAC GCGGGCCAGC GCACGCTCGA CCTGCTCGTC
GATGCCGCCG AGCTGGAGCG CCGCCGCGCG GCCTGGACCG CGCCGGAGGC TACCGTCACC
TCGCCGACCT TGCGCAAATA TGCGCGGCTC GTCGGGCCGG CGCATCTCGG CGCCGTCACC
CACTGA
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| Protein sequence | MALKDGKGET LPSRTITDGL DRAPHRAFLR AMGHDDVAIG QPFAGIVSTG ASVTPCSMSL
APQAEAAKAG LQAAGVTPFE FSTITVADSM SMNHAGMRFS LVSREIIADS IEAVTRAHGY
DGLIGFAACD KTLPGTMMGM IRVNRPSVFV YGGAALPGRW QGRDIGIVDV YEGVGRVYAG
EMDEAELTRL EKAGVPTVGS CAGQFTANTM AMVAETLGLA LPRSAMMPAV ASERRALAEE
SGRVLGRLIR EGGPRPRDLV TRRSLENAAA TVAATGGSTN AALHLPAIAH EAGISFTMED
IAAIFDRTPL LADLKPGGRF WARDLHEVGG VPTVLRAMLE AGVLHGDCPT ITGRTIGEIA
AAAPAPDGEV VRPADRPIAP TGGVIVLRGS LAPDGAMLKV AGLKRLSHEG PARVFDGEEA
AVDAVRRQDY QPGDVIVIRG EGPKGGPGMR EMLGVTALIY GQGMGEQVAL LTDGRFSGAT
RGMCIGHVGP EASAGGPLAL VRDGDRIRID AGQRTLDLLV DAAELERRRA AWTAPEATVT
SPTLRKYARL VGPAHLGAVT H
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