| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3260 |
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| Symbol | |
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| ID | 5197142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3588078 |
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| End bp | 3588743 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582805 |
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| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
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| Protein accession | YP_001263744 |
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| Protein GI | 148556162 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1225] Peroxiredoxin |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00000652947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000228018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGCCGGAAA CGCTGATCGC CCAATTCGAC GCCCTCCATG CGGAACGGTT GCGGAGTTGG
GACCCCGACA AGCTGCGCAG GAATGTCGAG CAGCGCGCGG CGCTGGTCGC GGCGTTCGAT
CCGGCGCGGA TCGTCGCGGT CGGCGACCGG CTGGAGCCGT TCAGCCTCGA ACTGTCGACG
GGCGAGACCG TGACGCTCGA CCGGCTGACC AGCCGCGGCC CGGTCGCGCT GGTCTTCTTC
CGCTTCGCCG GCTGCCCCGC CTGCAACATC GCCCTGCCGC ATTACGACCG GACGCTGCGC
CCCTTCCTCG ACGCGGCGGG CATCGCGCTG GTCGGGGTCA GCCCGCATCT GCCCGAAACG
GGGCTGAGCG AGATCGAGGC GCGCCACGGC CTCGGCTTCC CGGTCGCGGC GGACCGGGGC
AACGCCCTCG CCCGCCGCCT GGGCATCGCC TTCACCCCGC ACGACGATCC GCCCGTCCCG
CAGGGCGACA GCCATTGGAT CGGCGCGCTG ACCGGTACGG GAAGCTGGGA GCTGCCCCAG
CCCGCGGTGA TCCTGATCGA TGCCGATCAC GTCGTGCGGT TCGTCGACGT CAGCCCCGAC
TGGCTGCGCC GCACCGAGGC GGACACGGTG ATCGCGGCGG TCCGGCAACG GGCGCAGGCC
GCCTGA
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| Protein sequence | MPETLIAQFD ALHAERLRSW DPDKLRRNVE QRAALVAAFD PARIVAVGDR LEPFSLELST
GETVTLDRLT SRGPVALVFF RFAGCPACNI ALPHYDRTLR PFLDAAGIAL VGVSPHLPET
GLSEIEARHG LGFPVAADRG NALARRLGIA FTPHDDPPVP QGDSHWIGAL TGTGSWELPQ
PAVILIDADH VVRFVDVSPD WLRRTEADTV IAAVRQRAQA A
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