Gene Swit_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3253 
Symbol 
ID5196885 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3581975 
End bp3582526 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID640582798 
Producthypothetical protein 
Protein accessionYP_001263737 
Protein GI148556155 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000796104 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00083693 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACGGGTA TCGACATCCT CCCCGTGCTG GTGGCGGATG TCCTGCTGGG CGGGCTGTTC 
CTGCTCGGCG GGCTGGCCAA GGCGAAGGAC TTCGCCGGCT TCACCGGCAC GCTGGCGGCC
TATATGCTGG TGCCCGAGGC GCTGCTCGTC CCGGCGGCAG CGGCGATCGT CGCCGTCGAG
CTGGCGGCCG GCGCCGCGGC GATCGCCGCA GTCGCGATCG GCAGCCAGGC GGCGATGGGC
GCGATCGCGG CGCTGCTGCT GGTCTATGCG GCGGCGATGG CGGTCAACAT CGTGCGCGGC
CGCACCCATA TCGACTGCGG CTGCCTCGGC TTCGGCACCA GCCGCGCGTC GCTCGGCTGG
GAGTTGGTGG CGCGCAACAT GCTGCTCGCC GCCGTCGCGC TGGCGGCGGC CGCGCTGCCG
GTCGCGCCCC GCGCGCTCGG CGCCATCGAC GCGATCTCGG GGATCGGCGC GATCGTCGCG
TTCGCGCTCC TCTATTTCGG TTTCGGACAG TTCACGGCAG TGCGCTTGCA GGAAAAGGCG
GTGCTCAAAT GA
 
Protein sequence
MTGIDILPVL VADVLLGGLF LLGGLAKAKD FAGFTGTLAA YMLVPEALLV PAAAAIVAVE 
LAAGAAAIAA VAIGSQAAMG AIAALLLVYA AAMAVNIVRG RTHIDCGCLG FGTSRASLGW
ELVARNMLLA AVALAAAALP VAPRALGAID AISGIGAIVA FALLYFGFGQ FTAVRLQEKA
VLK