Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3253 |
Symbol | |
ID | 5196885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3581975 |
End bp | 3582526 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640582798 |
Product | hypothetical protein |
Protein accession | YP_001263737 |
Protein GI | 148556155 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0000796104 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00083693 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGACGGGTA TCGACATCCT CCCCGTGCTG GTGGCGGATG TCCTGCTGGG CGGGCTGTTC CTGCTCGGCG GGCTGGCCAA GGCGAAGGAC TTCGCCGGCT TCACCGGCAC GCTGGCGGCC TATATGCTGG TGCCCGAGGC GCTGCTCGTC CCGGCGGCAG CGGCGATCGT CGCCGTCGAG CTGGCGGCCG GCGCCGCGGC GATCGCCGCA GTCGCGATCG GCAGCCAGGC GGCGATGGGC GCGATCGCGG CGCTGCTGCT GGTCTATGCG GCGGCGATGG CGGTCAACAT CGTGCGCGGC CGCACCCATA TCGACTGCGG CTGCCTCGGC TTCGGCACCA GCCGCGCGTC GCTCGGCTGG GAGTTGGTGG CGCGCAACAT GCTGCTCGCC GCCGTCGCGC TGGCGGCGGC CGCGCTGCCG GTCGCGCCCC GCGCGCTCGG CGCCATCGAC GCGATCTCGG GGATCGGCGC GATCGTCGCG TTCGCGCTCC TCTATTTCGG TTTCGGACAG TTCACGGCAG TGCGCTTGCA GGAAAAGGCG GTGCTCAAAT GA
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Protein sequence | MTGIDILPVL VADVLLGGLF LLGGLAKAKD FAGFTGTLAA YMLVPEALLV PAAAAIVAVE LAAGAAAIAA VAIGSQAAMG AIAALLLVYA AAMAVNIVRG RTHIDCGCLG FGTSRASLGW ELVARNMLLA AVALAAAALP VAPRALGAID AISGIGAIVA FALLYFGFGQ FTAVRLQEKA VLK
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