Gene Swit_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3249 
Symbol 
ID5196533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3579518 
End bp3580216 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content71% 
IMG OID640582794 
Producthypothetical protein 
Protein accessionYP_001263733 
Protein GI148556151 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.444446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000758409 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGGCGGC GCCCGGCGGT CCTGCGCAGC GCGGCCGCCG GGCTGCTGCT GCTGGCGTCG 
GCGGCCTCCG CCGCCGAGCC GCGCGAATGG CTGATGATGG TCAAGTCGCG TAACCTCGAT
CCGGCGCGCA GCGCCGAGTT CGATCATTGG TACAACGACA TCGACATCCC CGACGTGCTC
GAGGTGCCCG GTTATGGCCG GGCGCGGCGC GGCCATGCGG TGACGGGCGA GAAGCCCTAT
GTCGCGCTCT ACACGATCAG CTCGCCGGAC ATCGACAAGA CGATCATCGC GATGCTGATG
GCGAGCTGGC GGATGGACCA GGTCGGCCGC GGCACGCCGC TGATCAAGGT CACCGAGCGC
CTCTATTATC GGCGCGCCGG CAAGGGCGCC CGCGACGCCG GCGCGGCGAA GCCGACCTAT
CTCTATCTCC ACCGCTCGGC GGGCGTGTCG GCGGGGGCGA TGCGCGGCGT GGTCGACGCG
GGCCTCGCGG GTAGCGCGGT GCCCTACGAC ATCTACCAGG TGCTGATGCA CGATCCGGTG
ACGGTGCCGA AGCAGCTCGT CCTGTTCGAG CTGTCGGCCG ATTCCGACGC GGCGGCGGCG
GAGACGGTCC GCCGCATCCA GCAGCGGCTC GGCGGCACCG GCGGCTGCGG CGCCGATTGC
GAGACTCTCT ACCGGCTGGT GCGCGACGTC GAGGGGTGA
 
Protein sequence
MRRRPAVLRS AAAGLLLLAS AASAAEPREW LMMVKSRNLD PARSAEFDHW YNDIDIPDVL 
EVPGYGRARR GHAVTGEKPY VALYTISSPD IDKTIIAMLM ASWRMDQVGR GTPLIKVTER
LYYRRAGKGA RDAGAAKPTY LYLHRSAGVS AGAMRGVVDA GLAGSAVPYD IYQVLMHDPV
TVPKQLVLFE LSADSDAAAA ETVRRIQQRL GGTGGCGADC ETLYRLVRDV EG