Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3249 |
Symbol | |
ID | 5196533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3579518 |
End bp | 3580216 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640582794 |
Product | hypothetical protein |
Protein accession | YP_001263733 |
Protein GI | 148556151 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.444446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000758409 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGGCGGC GCCCGGCGGT CCTGCGCAGC GCGGCCGCCG GGCTGCTGCT GCTGGCGTCG GCGGCCTCCG CCGCCGAGCC GCGCGAATGG CTGATGATGG TCAAGTCGCG TAACCTCGAT CCGGCGCGCA GCGCCGAGTT CGATCATTGG TACAACGACA TCGACATCCC CGACGTGCTC GAGGTGCCCG GTTATGGCCG GGCGCGGCGC GGCCATGCGG TGACGGGCGA GAAGCCCTAT GTCGCGCTCT ACACGATCAG CTCGCCGGAC ATCGACAAGA CGATCATCGC GATGCTGATG GCGAGCTGGC GGATGGACCA GGTCGGCCGC GGCACGCCGC TGATCAAGGT CACCGAGCGC CTCTATTATC GGCGCGCCGG CAAGGGCGCC CGCGACGCCG GCGCGGCGAA GCCGACCTAT CTCTATCTCC ACCGCTCGGC GGGCGTGTCG GCGGGGGCGA TGCGCGGCGT GGTCGACGCG GGCCTCGCGG GTAGCGCGGT GCCCTACGAC ATCTACCAGG TGCTGATGCA CGATCCGGTG ACGGTGCCGA AGCAGCTCGT CCTGTTCGAG CTGTCGGCCG ATTCCGACGC GGCGGCGGCG GAGACGGTCC GCCGCATCCA GCAGCGGCTC GGCGGCACCG GCGGCTGCGG CGCCGATTGC GAGACTCTCT ACCGGCTGGT GCGCGACGTC GAGGGGTGA
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Protein sequence | MRRRPAVLRS AAAGLLLLAS AASAAEPREW LMMVKSRNLD PARSAEFDHW YNDIDIPDVL EVPGYGRARR GHAVTGEKPY VALYTISSPD IDKTIIAMLM ASWRMDQVGR GTPLIKVTER LYYRRAGKGA RDAGAAKPTY LYLHRSAGVS AGAMRGVVDA GLAGSAVPYD IYQVLMHDPV TVPKQLVLFE LSADSDAAAA ETVRRIQQRL GGTGGCGADC ETLYRLVRDV EG
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