| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3239 |
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| Symbol | |
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| ID | 5196816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3562748 |
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| End bp | 3563452 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582784 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001263723 |
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| Protein GI | 148556141 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.727709 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0945396 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATCACAA CCGCGAAAAG CAGGCCGCCG GCGCGCAAGG CGACCCAGGC CCGAGGCCGC
GCCCGGCGGG TGGAATTGCT GGAAGCGGCC CGGGCGATGC TCGGCACGCA GAACCTGCAC
CAGATCGGCA TGATCGCGGT CGCCGAGACC GCCGGCATCC CCGCCTCGTC GGCCTATCAT
TTCTTCCCCG AGATCAGCGA CCTGTGGAAG GAATTGGCCC GCACCATCGC CACCGCGCAG
GCCGAGCTCG ACCAGCGCAT CCCGCAGAGC GACGAGTGGG AGTCGGTCGT CGAACGCTCG
CTCGAATGCC ATCAGCGCGC GTTCAACGCC GACCGCGCGG CGCGGCAGCT GATGCTCGGC
CCGCACACGC CGCCCGAGAT CAAGCATGCG GGCTGCAAGG AGAATTTCCG TTTCGGCACC
GCGCTGTGGC AGGCGATGCG GCGGCAGTTC CTGCTGCCCG GCCTCGCCGA CTCGCGCGAG
CTGTTCTTCA AGGCGCTGCT GATCGCCGAC CTGTTCTTCT CGCTGTCGGT GGCCGAGCAG
GACCGGGTGA GCGACGAGGC GCTGGCCGAG GCGAAGCTGG CGACGATCGC CTATCTGCGC
GCCTATCTGC CGACCCGCCT CGCCCGGATC GAGGAAGGCG GCGAGATTCC GCCGGTGCCC
GCGACCGAGG CCTGGGGCGC CCTGGCGCCG GCCGAACAGG CCTGA
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| Protein sequence | MITTAKSRPP ARKATQARGR ARRVELLEAA RAMLGTQNLH QIGMIAVAET AGIPASSAYH
FFPEISDLWK ELARTIATAQ AELDQRIPQS DEWESVVERS LECHQRAFNA DRAARQLMLG
PHTPPEIKHA GCKENFRFGT ALWQAMRRQF LLPGLADSRE LFFKALLIAD LFFSLSVAEQ
DRVSDEALAE AKLATIAYLR AYLPTRLARI EEGGEIPPVP ATEAWGALAP AEQA
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