Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3235 |
Symbol | |
ID | 5196812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | + |
Start bp | 3557109 |
End bp | 3558899 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640582780 |
Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
Protein accession | YP_001263719 |
Protein GI | 148556137 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.19985 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCCCGT TGGAGCCTAC CAACATCGAG GCGCCGGAAT ATTTCCATAA GGTCGTCGAT TGCCAATGGG CCTGCCCGGC CCACACACCC GTCCCGGAAT ATATCCGCCT GATCGCGCAG GGGCGTCATG CCGACGCCTA TATGGTCAAC TGGAAATCGA ACGTCTTCCC GGGAATCCTC GGCCGGACCT GCGACCGCCC GTGCGAGCCG GCGTGCCGGC GCGGCCGGGT CGACGAGGAG CCGGTGGCGA TCTGCCGATT GAAGCGGGTC GCCGCCGACA ACAAGGGCGA TGTCGCCGCG CGCATGCCGC AGCCGCCGAA GAAGCGGATC GGCAAGAAGG TCGCCTGCAT CGGCGCCGGG CCCGCCTCGA TGACGGTGGC GCGCGATCTC GCCCCGCTCG GCTACGACGT CACCGTCTAC GACGCCGACG CCAAGGCGGG CGGCATGATC CGCAGCCAGA TCCCGCGCTT CCGCCTGCCG GAAAGCGTGA TCGACGAGGA GATGGGCTTC ATCACCGCGC TGGGCCCGAG GATGCGGCTC AACCGGCGGG TCGACAGCCT CGCGGCGCTG CTGCGCCGGG ACTATGACGC GATCTTCGTC GGCACCGGCG CGCCGCGCGG CCGCGACCTC GACATCCCCG GCCGCGCCGA GGCCGCCGCC AACGTCCATA TCGGCATCGA CTGGCTCGCC AACGTCTCGT TCGGCCATGT CGACACGATC GGCAAGCGGG TGATCGTGCT CGGCGGCGGC AACACCGCGA TGGACTGCTG CCGCACCTCG CGCCGGCTCG GCGGCGGCGA GGTCAAGGTC ATCGTCCGGT CGGGCTATGA CGAGATGAAG GCGTCGCCCT GGGAGAAGGA GGACGCCCAG CACGAGGGCA TCCCGATCCT CAACTATCTG GTCCCCAAGG CCTTCACCCA TGCGGACGGC CGGCTGACCG GCGTCACCTT CGAGAAGGTC GCGCCGGTGG TCGACGAGCA GGGCCGCCGC CGGCTCGAAC CGACCGGCGA GCCCGACGAG CATCACGAAT GCGACGACGT GCTGGTCGCG ATCGGGCAGG AGAACAGCTT CCCCTGGATC GAGCGCGACA TCGGCCTCGA CTTCGACAAA TGGGGCATGC CCGTCGTCGA CGAGACGACC TTCCAGTCGA CCCACCCCAG GGTGTTCTTC GGGGGCGACG CCGCCTTCGG GCCGAAGAAC ATCATCTGGG CGGTCGCGCA CGGCCATGAG GCGGCGATCT CGATCGACCA TCATTGCCGG GGCGCCGACC TGCGGCTGCG GCCGCCGCCC GGCGTGCGGG TGTCGTCGCA GAAGATGGGC ATCCACGAGT GGAGCTACGA CAACGACGTC TCGCCCGAGG ACCGGCAGAA GGTGCCGCTG CTGCCGCTGG CCGAGGCGCT GGGCGACGTC AAGGCCGAGG TCGAGCTGGG CTTCGACGAC CCGCGCAGCT GGGCGGAGAC GCAGCGCTGC CTCAACTGCG ACGTGCAGAC CGTGTTCACC CGGACGCTGT GCATCGAATG CGACGCCTGC GTCGACATCT GCCCGACCGA CTGCATCACC TTCACCGTCA ACGGCGACGA GGCCGAGCTG CGGCCCCGGC TCAAGGCGCC GGCGACCAAT CCCGATCAGG CGCTCTACGT CTCCTCGACC CTGCCGACCG GCCGGGTGCT GGTGAAGGAC GAGGACGTCT GCCTGCACTG CGGCCTGTGC GCCGAGCGCT GCCCGACCGG AGCCTGGGAC ATGCAGAAGA CGCTGGTCGA GATGAGCCAT GCGGGAGGGT GCGCGCGATG A
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Protein sequence | MSPLEPTNIE APEYFHKVVD CQWACPAHTP VPEYIRLIAQ GRHADAYMVN WKSNVFPGIL GRTCDRPCEP ACRRGRVDEE PVAICRLKRV AADNKGDVAA RMPQPPKKRI GKKVACIGAG PASMTVARDL APLGYDVTVY DADAKAGGMI RSQIPRFRLP ESVIDEEMGF ITALGPRMRL NRRVDSLAAL LRRDYDAIFV GTGAPRGRDL DIPGRAEAAA NVHIGIDWLA NVSFGHVDTI GKRVIVLGGG NTAMDCCRTS RRLGGGEVKV IVRSGYDEMK ASPWEKEDAQ HEGIPILNYL VPKAFTHADG RLTGVTFEKV APVVDEQGRR RLEPTGEPDE HHECDDVLVA IGQENSFPWI ERDIGLDFDK WGMPVVDETT FQSTHPRVFF GGDAAFGPKN IIWAVAHGHE AAISIDHHCR GADLRLRPPP GVRVSSQKMG IHEWSYDNDV SPEDRQKVPL LPLAEALGDV KAEVELGFDD PRSWAETQRC LNCDVQTVFT RTLCIECDAC VDICPTDCIT FTVNGDEAEL RPRLKAPATN PDQALYVSST LPTGRVLVKD EDVCLHCGLC AERCPTGAWD MQKTLVEMSH AGGCAR
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