| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3229 |
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| Symbol | |
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| ID | 5196939 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3549624 |
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| End bp | 3551108 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640582774 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001263713 |
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| Protein GI | 148556131 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.436149 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCTCG CGCTCGGCAC CTTCATGCAG GTGCTCGACA CGACCATCGC CAACGTCTCG
CTGACCACCA TCGCCGGCAA TCTCGGCGTC AGCTCGGACA GCTCGACCTG GGTGATCACC
GCCTTCGCGG TCGCCAACGG CGTCACCGTG CCGCTGACCG GCTGGCTGAT GCGCCGCTTC
GGCGTGGTGC GCACCTTCGT CGTCTCGGTG ATCCTGTTCA CCCTCGCCTC GCTGCTGTGC
GGCATCGCCT GGAGCCTGCC CTCGCTGATC CTGTTCCGCG TCCTGCAAGG GGCGGTGTCG
GGGCCGATGA TCCCGGGCAG CCAGGCGCTG CTGATCTCGA TCTTCCCGCC CGAGCGGCGA
TCGACCGCGC TCGGCATCTG GTCGATGACC ACGCTGGTCG GCCCGGTCGC GGGGCCGATC
CTGGGCGGCT ACATCTCCGA CAATTACCAT TGGGGCTGGA TCTTCCTGAT CAACGTCCCC
GTCGGCCTCG CCTCGGCCTT CATCTCCTGG CGCTTCATGA AGAGCCGCGA GACGGCGACC
GCGAAGCTGC CGATCGACGC GGTCGGGCTC GGCCTGCTCG CCTTCTGGGT CGGCTGCCTC
CAGGTCTTCC TCGACCTCGG CAAGAACGAG GACTGGTTCC ACTCGCCGTT CATCACGACG
ATGGCGCTGC TCGCGGCGAT CGGCTTCGTC GCCTGGTTGA TCTGGGAGCT GACCGAGGAG
CGGCCGGCGG TCGACCTGTC GCTGTTCGCC AACCGCAACT TCGCGCTCGG CACGGTGGCG
CTGACGCTCG GCTATGCGGT GTTCTTCGGC AACACGCTGC TGCTGCCGCT CTGGCTCCAG
CAGCAGCTCG GCTACACCGC GACCTGGGCG GGCCTGGTCT CGGCGCCCAG CGGCATCGTC
TCGGTGATCG CGACGCCGTT CGTCGCCCGC CTGTCGGGCA AGGTCGACGC GCGCTGGCTG
GCGAGCTTCG CCTTCGTCGC CTTCGCCGCC TCCTATCTGA TGCGCAGCGG CTACACGACG
CAGACCGACT ATTTTCATTT CATGCTGCCG ATGCTGGTGC AGGGGCTGGG GATGAGCACC
TTCTTCGTGG CGATGCTCAG CATCTCGCTC GACGGCGTGT CGGCCGAGCG GACCCCGTCG
GCGACGGGCC TGTCCAACTT CGCCCGCATC ACCGGCAGCA GCTTCGCCGC CTCGCTGGTG
ACGACGATGT GGGACCGGCG CGAGGCGCTG CACCAGAGCC GGCTGGCCGA CGCCAGCTCA
CCCTTCGATC CGGTGTTCCG CCACGCCGCC GACGCGCTCG GCCAGCTCGG CCTGACCGCG
CAGCAGGGCT ATGGCGTGCT GACCCGCGAG ATGGTGGGCC AGGCCTATCT GCTCTCGTCG
AACGACATCT TCCGGGCCAG CGCCTGGGCG ATGATGGCGA TGATCGCGAT CGTCTGGATC
GTCCGGAAGC CCGCGCCGCT GACCGGCCCG GTGGCGGCGG ACTGA
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| Protein sequence | MALALGTFMQ VLDTTIANVS LTTIAGNLGV SSDSSTWVIT AFAVANGVTV PLTGWLMRRF
GVVRTFVVSV ILFTLASLLC GIAWSLPSLI LFRVLQGAVS GPMIPGSQAL LISIFPPERR
STALGIWSMT TLVGPVAGPI LGGYISDNYH WGWIFLINVP VGLASAFISW RFMKSRETAT
AKLPIDAVGL GLLAFWVGCL QVFLDLGKNE DWFHSPFITT MALLAAIGFV AWLIWELTEE
RPAVDLSLFA NRNFALGTVA LTLGYAVFFG NTLLLPLWLQ QQLGYTATWA GLVSAPSGIV
SVIATPFVAR LSGKVDARWL ASFAFVAFAA SYLMRSGYTT QTDYFHFMLP MLVQGLGMST
FFVAMLSISL DGVSAERTPS ATGLSNFARI TGSSFAASLV TTMWDRREAL HQSRLADASS
PFDPVFRHAA DALGQLGLTA QQGYGVLTRE MVGQAYLLSS NDIFRASAWA MMAMIAIVWI
VRKPAPLTGP VAAD
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