| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3225 |
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| Symbol | |
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| ID | 5196935 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3543123 |
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| End bp | 3545534 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640582770 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001263709 |
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| Protein GI | 148556127 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0588544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA GGGATAGGAC GGGCAGCAGC TTTCTGGCGC TGGCCTGCAT CGGTTTCATC
ACCAGCGCGC CGGCGGCGGC ACAGACCGCG GAGAAAGCCC CGGACGGCGA AAAGCGGCTC
GGCGGCATGA CCGTCAGCGC GACCGCGATC GACGAGGCGA CGCCGAAGGT CGAGCGGCCG
GAATCGCCCA AATATACCCG ACCGCTGCTC GACACGCCGC AGACCATCAC CGTCATCAAC
AAGGCGACGA TCCAGCAGCA GAACCTGCTG ACGCTGCGCG ACGTGCTCAG CACCGTGCCG
GGCATCACCT TCGGCGCCGG CGAAGGCGGC TTCGGCTATG GCGACCGCAT CATCCTGCGC
GGCCAGGACG CCAAGAACGA CGTCACCGTC GACGGCGTCC GCTCGGGCGC CTTCCTCAAC
CGCAACGAGG TCTACAATAT CGAGCAGGTC GAGGTGACCA ACGGCGCCAA TTCGGTGATG
AACGGCGGCG GCTCGGTCGC GGGCACGATC AACCTGGTGA CCAAGCGCCC GCTGGCCGAC
GACCAGACCG TGCTGAGCGC CGGCGTCGGC ACCGACAATT ATTACCGCGC GACCGTCGAC
GCCAACCGGC GGCTCAGCGA CCTGATCGCG GTGCGGATCA ATGCGGTCTA TCACGAGAAC
GACGTGCCCG GCCGCGACGT CGAGGATTAC AAGCGCTGGG GCATCGCCCC GGCGATCACC
ATCGGCATCG ACGGGCCGAC CAGCCTGACC CTCCAGGCCG AGCATCTCGA CGACAAGGCG
ATGCCGCAAT ATGGCCTGCG CTATTATGCC AATAATGGCG GCTTCCTCGA CGATTTCGAC
CGTAGCGGCT ATTATGGCTT CGCCAATCTC GACCAGCAGA ACAGCAAGAC CAACGCGCTG
CAGGCGATCT TCAGCCACGC GTTCAGCGAC AAGGTGAGCA TCCGCAACCT CACCCGCTAC
GAGAAGATCC GCCAGAACAC GATCACCAGC CAGCCGAACG GCACCTTCTG CCTGGCGTCG
ACCGGGCTGC AGCCGCTGGA CATCAACGGC GTCGCCGCCG CCTGCCCGGC CACCGTGCCC
GCGGGCTATT ACCTGCCCAC CGGCGGCCGC GGCGTGCAGC GCTTCATCAC CAACGAGACC
CACTATAGCC AGACCGACCT CAGCGCCAAT TTCGACACCG GCGGCATCGA GCATTCGCTG
GTGATCGGCG TCTCGGCGCT ATGGGAGGAT TATCATCAGA AGCAGGGCAC GCTGCCGCGC
AACGCCGACG GATCGACCCC GGCCTTCCCG CTGGTCAGCA TCTCCAACCC GGAGGCGACC
GTCCAGGGCC CGGCCGGCTT CACCTATGGC AACAACACCT ATAACGGCCC GATCAACTTC
ATCCTGTCGA GCCGCAACGT CGGCACGCAG CGGAGCTATG CCGCCTATCT GTTCGACACG
GTGAAGTTCG CCGACTGGTT CGAGATCAAC GGCGGCGTCC GCTACGAGGA CGTCAAGGGA
TCGAGCCGGA CGCTCAGCTA CGTCACCACG GCGGGGGCCG CCAATCTCGG CGACCTCAGC
GCGGCGACCG GCCCGTTCAA CTTCGGCGAC AAGCTCTTCT CCTACCGCGT CGGCGCGGTG
GTGAAGCCGA CGCCGAACAC CAGCCTCTAC GTCGCCTATG GCAATTCGAA GCTGCCGTCC
AAGGCCTCGG TCGACGGCGC CTGCACCGCC GCCAATTGCC GCCTGAAGCC GGAGACGACC
GAGAATTACG AGATCGGCGC CAAGGCCGAC CTGTTCGACG CCCGGCTGCT GCTGACCGCC
GCCATCTTCC GCAACGAGCG CAACTCGATC AAGGTCAACT CGAACGATCC GACCCTGCCC
GACCAGACGC TGGACGGCGG CCAGCGGGTG GAGGGCCTGT CGCTCGGCGC GTCGGGCAAC
ATCACCAGCA ACTGGACGAT CTCGGCCAAC TACATGTACC TGAAGTCGAA GATCCTGCAG
GGCGTGTCGA ACTTCTGCGT CGCCAATCCG GGGGCGACGG GCTGCGGCAA CAGCGCCGCC
TTCCCCGATC CGACGCGCGG CTATTCGCTG ACCAACACGC CGAAGCATTC GGGCAGCCTG
TTCACCACCT ACCGCTTCGA CTTCGGGCTG GAGCTGGGCT ACGGCCTGAC CCACCAGGGC
AGCTTCCTGC TCAACCAGCC GACGCTCGCG CAGCTCACCG CCGGCAACTA TGTCGGCTAT
CGGGTGCCGA GCTACACGAT CCACCGCTTC ATGGCGGCCT ATCCGATCAC GCCGCAGCTC
AAGGCGCAGG TGAACGTCCA GAACTTCACC AACGAGAAAT ATGTGACGAC CGTGCGCAAC
TCCGTCGGCG GCAGCTGGGC ACAGCCCGCG CCGACCCGCT CGGCGGTGTT CAGCCTGAAC
TATCAGTTCT GA
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| Protein sequence | MIDRDRTGSS FLALACIGFI TSAPAAAQTA EKAPDGEKRL GGMTVSATAI DEATPKVERP
ESPKYTRPLL DTPQTITVIN KATIQQQNLL TLRDVLSTVP GITFGAGEGG FGYGDRIILR
GQDAKNDVTV DGVRSGAFLN RNEVYNIEQV EVTNGANSVM NGGGSVAGTI NLVTKRPLAD
DQTVLSAGVG TDNYYRATVD ANRRLSDLIA VRINAVYHEN DVPGRDVEDY KRWGIAPAIT
IGIDGPTSLT LQAEHLDDKA MPQYGLRYYA NNGGFLDDFD RSGYYGFANL DQQNSKTNAL
QAIFSHAFSD KVSIRNLTRY EKIRQNTITS QPNGTFCLAS TGLQPLDING VAAACPATVP
AGYYLPTGGR GVQRFITNET HYSQTDLSAN FDTGGIEHSL VIGVSALWED YHQKQGTLPR
NADGSTPAFP LVSISNPEAT VQGPAGFTYG NNTYNGPINF ILSSRNVGTQ RSYAAYLFDT
VKFADWFEIN GGVRYEDVKG SSRTLSYVTT AGAANLGDLS AATGPFNFGD KLFSYRVGAV
VKPTPNTSLY VAYGNSKLPS KASVDGACTA ANCRLKPETT ENYEIGAKAD LFDARLLLTA
AIFRNERNSI KVNSNDPTLP DQTLDGGQRV EGLSLGASGN ITSNWTISAN YMYLKSKILQ
GVSNFCVANP GATGCGNSAA FPDPTRGYSL TNTPKHSGSL FTTYRFDFGL ELGYGLTHQG
SFLLNQPTLA QLTAGNYVGY RVPSYTIHRF MAAYPITPQL KAQVNVQNFT NEKYVTTVRN
SVGGSWAQPA PTRSAVFSLN YQF
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