| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3221 |
|---|
| Symbol | |
|---|
| ID | 5197805 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingomonas wittichii RW1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009511 |
|---|
| Strand | - |
|---|
| Start bp | 3540300 |
|---|
| End bp | 3540986 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 640582766 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001263705 |
|---|
| Protein GI | 148556123 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0359488 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGACCG GCGCGACGAT GCGGACACGA ACGGCGACGG CGCTGCGGGC GACCGCCGCG
CTGCTGAGCG TGGGGGTGGC GCTGGTCTCC TACCGCTATC TGGCCGGGGT CGGGCCACGG
GCACCGCAGA TCCTCGCCAA CCTGTTCGCC CGGCCCTGGC TCGCGCTCCA TGTCGCGGGC
GCGGCGACGG CGCTGCTGCT CGGCCCCGCG CAGTTCGTCG CGGGGCTGCG GGCGGCCGCG
CCCCGGGTCC ATCGCTGGGT CGGGCGGAGC TATGTGCTCG GCTGCCTGCT CGGCGCGGTC
GCCGGGCTGG TGCTCGCCTT CGGATCGACC GCCGGGCCGG TCGCGACCGT CGGCTTCGGC
ACCCTCTCGA TCCTGTGGAT CGTCGTCAAT GTCGAGGGGT GGCGCGCCGC GCTCCAGCGC
CGCTTCGCCG ATCATCGCGC CTGGATGATC CGCTCCTTCG CGCTGACCTT CGCGGCGGTG
ACGCTGCGGC TCTACCTGCC GCTCTTCCCG CTGCTCGGCG TCGATTTCGT CGACGGCTAT
CGCGCGGTAT CGATCCTGAG CTGGGTGCCC AACCTGATCC TCGCCGAGCT CTATGTCCGG
CGGGCGATCC CGGCGGCGGC GATCCTCGCC GCGACGAAGG CCGCCCGCTC CGCCACCGGC
GCCAGCGGCA GCGCGACCAG CTCATAG
|
|---|
| Protein sequence | MMTGATMRTR TATALRATAA LLSVGVALVS YRYLAGVGPR APQILANLFA RPWLALHVAG
AATALLLGPA QFVAGLRAAA PRVHRWVGRS YVLGCLLGAV AGLVLAFGST AGPVATVGFG
TLSILWIVVN VEGWRAALQR RFADHRAWMI RSFALTFAAV TLRLYLPLFP LLGVDFVDGY
RAVSILSWVP NLILAELYVR RAIPAAAILA ATKAARSATG ASGSATSS
|
|---|
| |