Gene Swit_3210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3210 
Symbol 
ID5198259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3528260 
End bp3529372 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content73% 
IMG OID640582756 
Producthypothetical protein 
Protein accessionYP_001263695 
Protein GI148556113 
COG category[S] Function unknown 
COG ID[COG5330] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.325243 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.217196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGGC TCGAGGACGA ACGGCAGGAG ATGGGGAGGC CCGCGTCCGC GCGCTGGCTC 
ACCGATGCCG CGCGCGCCCT CGACAGCGCC GAAAGCCGGG TCGGCCGCGC CGCCGGCGAC
CTGTTCCGGT CCGACGGCCC CGATCTTTCC GACCAGCATC GCGCCCAGAT CGCGCAACTC
ATGCGCGCGC TGATCGGCGC GATCGAGGAC GACCTGCGCA TCCGCCTGAT CGATTCGCTG
GCCGACGAGC CGCATCCCGA GCTGCTCGCC GCGCTCGGAT CGGCGACGAT GCCGATCGCG
CAGCCGCTGC TCGAACGGAC GCGGCTGCTG CGCGAGGCCG ATCTGGTCGC GGCGATGCTG
CGCCGGGTCG ACGAGCATCG CCTCGCGCTG ATGCTGGGCC GCGATTCGCC CTATCATGTC
GCCGATCTGG CGCAGCGGCT GCTCGACCTC GGCGACGCCG CGATCGCCGA GGCGACGATG
GCGCTGCTGG TCGCCGAGAG CCGCCGCTAC GATCCGTTCG GCGATCCCGC GCTGGCGCGG
ACCGACCTGC CGCCCGGGCC GCACCGCAAG CTGCTCTGGG CGGTGGCGGC GGCGCTGCGC
CACTATCTGA TCCGCCACCA CGGCCTGCCC GACAGCCAGG CCGACCTGCT GCTCGCCGCC
GCGGTGCGCG CGCTGCTCGC CGAGCATGAT GACGCCGATA CGCTGGAGGG TCGCGCCGAC
GCGCTCGCCG CGCTGCTCGA TGCGGCCGGG CTGATCGACG ACGCGCTGCT CGTCGACGCG
CTGGAGGAAG GCTGGCTGGC GCTGTTCACT GCGGCGGTCG CGCGGCGGGC GGGGATCGAT
TCGGCGGGCG TCTGGTCGAT GATCACCGAT CCGTCGGGGA TGATGCTGGG CACGGTGCTG
CGCGCGATCG ACTGCGGGCG CGAGGCGGCG GTGACGATGC TGTGGCGGAT CGGATCGGCC
GAGGACGCCG ACGAGGAGGC GATCGTCGCC CGCGCCGACG CGTTCGACGC GCTCGGCCGG
CGCGAGGCGG CCGAGGCGGT GCTGATCTGG CGGCTCGATC CCAATTACCG CCGCGCCGTG
ATCGAGATCG GCGAAGGCGG CCGGCGGCGA TGA
 
Protein sequence
MIGLEDERQE MGRPASARWL TDAARALDSA ESRVGRAAGD LFRSDGPDLS DQHRAQIAQL 
MRALIGAIED DLRIRLIDSL ADEPHPELLA ALGSATMPIA QPLLERTRLL READLVAAML
RRVDEHRLAL MLGRDSPYHV ADLAQRLLDL GDAAIAEATM ALLVAESRRY DPFGDPALAR
TDLPPGPHRK LLWAVAAALR HYLIRHHGLP DSQADLLLAA AVRALLAEHD DADTLEGRAD
ALAALLDAAG LIDDALLVDA LEEGWLALFT AAVARRAGID SAGVWSMITD PSGMMLGTVL
RAIDCGREAA VTMLWRIGSA EDADEEAIVA RADAFDALGR REAAEAVLIW RLDPNYRRAV
IEIGEGGRRR