| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3177 |
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| Symbol | |
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| ID | 5199281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3487290 |
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| End bp | 3489113 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640582724 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_001263663 |
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| Protein GI | 148556081 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.596481 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGTTC CGCTCGACCG CATCCGCAAT TTTTCGATCA TCGCCCATAT CGACCATGGC
AAGTCGACCC TGGCCGATCG CCTGATCCAG CGCACCGGCG GCCTGACCGA CCGCGAGATG
TCGGCGCAGG TGCTCGACAA CATGGACATC GAGAAGGAGC GCGGCATCAC CATCAAGGCG
CAGACCGTGC GCCTCGACTA CAAGGCCAAG GACGGGCAGG ACTATGTCCT CAACCTGATG
GACACGCCGG GCCATGTCGA CTTCGCCTAT GAGGTGTCGC GCAGCCTGGC GGCGTGCGAG
GGCGCGCTGC TCGTCGTCGA CGCGGCGCAG GGGGTCGAGG CGCAGACCCT CGCCAATGTC
TACCAGTCGA TCGAGCACGA CCATGAGATC GTGCCCGTCA TCAACAAGAT CGACCTGCCC
GCCGCCGAGC CCGACAAGGT CAAGGCGGAG ATCGAGGACA TCATCGGCCT GCCCGCCGAC
GATGCCGTCC TCGCCAGCGC CAAGTCCGGC ATCGGCATCG ACGAGATATT GGAGGCGATC
GTCGCCCGCA TCCCGGCGCC CAAGGGTGAT CCGGCCGCGC CGCTCAAGGC GATGCTCGTC
GACAGCTGGT ACGATCCCTA TCTGGGCGTC GTCATCCTGA TCCGGGTCGT CGAAGGCACG
ATCCGCAAGG GCCAGCAGAT CAAGTTCATG CAGGCCGACA CGGTCCACCT GGTCGACCGG
GTCGGATGCT TCCGGCCGAA GATCGAGCAG CTCGGCGAGA TGGGGCCCGG CGAGATCGGC
TTCATCACCG CGCAGATCAA GGAGGTCAGC CAGACCGCCG TCGGCGACAC GATCACCGAC
GCCAGGAAGC CGACCGCCGA GCCGCTGCCG GGCTTCAAGG AGGTCCAGCC GGTGGTGTTC
TGCGGCCTGT TCCCGGTCGA CGCCGCCGAT TTCGAGAAGC TGCGCGAGAG CCTCTACAAG
CTGCGCCTCA ACGACGCCTC GTTCAGCTTC GAGGCCGAGT CCTCGGCGGC GCTGGGCTTC
GGCTTCCGTT GCGGCTTCCT CGGCCTCCTC CACCTCGAGA TCATCCAGGA GCGGCTGACC
CGCGAATATG ACCTCGACCT GATCACCACC GCGCCATCGG TGGTCTATCG CCTCCACCTC
AGCCATTCGA AGACCGAGGA CGCCAAGGTC ATCGAGCTGC ACAACCCCGC CGACATGCCC
GATCCCAACC GGATCGACAT GATCGAGGAG CCGTGGATCG AGGCGACCAT CTACGTCCCC
GACGAATATC TCGGCTCGCT GCTCAAGCTG TGCCAGGACC GGCGCGGCAT CCAGAAGAAC
CTGACCTATG TCGGCGGCCG CGCGCAGATC ACCTATGAGC TGCCGCTCAA CGAGGTGGTG
TTCGACTTCT ACGACCGGCT CAAGTCGATC AGCCGGGGCT ATGCCAGCTT CGACTATCAC
CAGATCGGCT ATCGCGAGGG CGACCTCGTC AAGATGAGTA TCATGGTCAA CGGCGAGCCG
GTCGACGCGC TCAGCATGAT CGTCCATCGC GCCGCCGCCG AAGCGCGCGG CCGGCACATG
TGCGAGCGGC TCAAGGACCT GATCCCCCGC CACCTGTTCA AGATCCCGGT GCAGGCCGCG
ATCGGCGGCA AGGTGATCGC GCGCGAGACG ATCGCGGCGA TGCGCAAGGA CGTGACCGCC
AAATGCTATG GCGGCGACGC CACCCGCAAG CGCAAGCTCC TCGAGAAGCA GAAGGAGGGC
AAGAAGCGGA TGCGCGAGTA CGGCAACGTC AACATCCCGC AGGAAGCCTT CATCGCCGCG
CTGCGGATGG GCGACGAGGG CTGA
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| Protein sequence | MTVPLDRIRN FSIIAHIDHG KSTLADRLIQ RTGGLTDREM SAQVLDNMDI EKERGITIKA
QTVRLDYKAK DGQDYVLNLM DTPGHVDFAY EVSRSLAACE GALLVVDAAQ GVEAQTLANV
YQSIEHDHEI VPVINKIDLP AAEPDKVKAE IEDIIGLPAD DAVLASAKSG IGIDEILEAI
VARIPAPKGD PAAPLKAMLV DSWYDPYLGV VILIRVVEGT IRKGQQIKFM QADTVHLVDR
VGCFRPKIEQ LGEMGPGEIG FITAQIKEVS QTAVGDTITD ARKPTAEPLP GFKEVQPVVF
CGLFPVDAAD FEKLRESLYK LRLNDASFSF EAESSAALGF GFRCGFLGLL HLEIIQERLT
REYDLDLITT APSVVYRLHL SHSKTEDAKV IELHNPADMP DPNRIDMIEE PWIEATIYVP
DEYLGSLLKL CQDRRGIQKN LTYVGGRAQI TYELPLNEVV FDFYDRLKSI SRGYASFDYH
QIGYREGDLV KMSIMVNGEP VDALSMIVHR AAAEARGRHM CERLKDLIPR HLFKIPVQAA
IGGKVIARET IAAMRKDVTA KCYGGDATRK RKLLEKQKEG KKRMREYGNV NIPQEAFIAA
LRMGDEG
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