Gene Swit_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3175 
Symbol 
ID5199279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3485583 
End bp3486011 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content70% 
IMG OID640582722 
Producthypothetical protein 
Protein accessionYP_001263661 
Protein GI148556079 
COG category[R] General function prediction only 
COG ID[COG2346] Truncated hemoglobins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGGGT TGCGGATCGA CGATCAGGGG CTCGGCCGCT TGGTCGATAC CTTCTATGCC 
CGCATCCGCG CCGATGACGA GCTCGGCCCG ATCTTCAACG ACGCGGTCGA GGACTGGCCA
GAGCATCTCG CCAAGCTGAC CGACTTCTGG TCGTCGGTGA TGCTGACCAG CGGCCGCTAC
AAGGGGCAGC CCGTCCCCGC CCATGCCCGC CATCGCAGCC GGATCACGCC GGCGCTGTTC
GACCGCTGGC TGGCGATCTG GGCGCAGACC ACCGACGAGC TGATGGAGCC GGGCGCCGCC
GCCGCGCTCC AGGACAAGGC CCGGCGCATC GCCGAGAGCC TGCAGCTCGC TCTGTTCTTC
CGCCTCGGCC CGCCGCCGCA ACAGCCGCAA CGGCAAGAGG CCGGCGCCGC CGGGGGTGCC
GCGCAATGA
 
Protein sequence
MSGLRIDDQG LGRLVDTFYA RIRADDELGP IFNDAVEDWP EHLAKLTDFW SSVMLTSGRY 
KGQPVPAHAR HRSRITPALF DRWLAIWAQT TDELMEPGAA AALQDKARRI AESLQLALFF
RLGPPPQQPQ RQEAGAAGGA AQ