Gene Swit_3158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3158 
Symbol 
ID5198905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3472090 
End bp3472581 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content75% 
IMG OID640582705 
Producthypothetical protein 
Protein accessionYP_001263644 
Protein GI148556062 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.616867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.429528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGCCCGCCTC CCCCGTCTGC TACGCCGCCG ACGGCGGCGA CGCCTATATG 
GGCTATGCCG CGCGCGACGA GATCGTCGCC GCGCTGAACG AGCTGCTGGA GGCCGAGCGC
GCCGGGGCGC GGGTCGCGCT GGCCAGCGCC AGGGCGGCCG AGGACGCTCG CCAGGGCGCG
CTGATGACGA TGATCCGCGC CGACGAGGCG CGCTGGTGCG CGATGCTGTC GCGCCAGCTC
AAGCGGCTCG ACGCGACGCC GTCGCGGCGG ACCGGCGCCT TCCACGGCAA GGCGATGGCG
ATCGCCCGCC CGCTCGAACG GCTCGCCTTC CTCAACCGGG GGCAGGCCTG GGTGGTGCGC
AAGCTGGAGG CGCTGCTCCC CCGCGTGCGC GACGAGACGC TCCACCGCGA CCTCAAGGCG
ATGCTCCACA GCCACCGCAC CAACATCGCC GAGGCGGAGG ACCTGCTGGC CGCCTCGGGC
TACGCGCCCT AG
 
Protein sequence
MSDEPASPVC YAADGGDAYM GYAARDEIVA ALNELLEAER AGARVALASA RAAEDARQGA 
LMTMIRADEA RWCAMLSRQL KRLDATPSRR TGAFHGKAMA IARPLERLAF LNRGQAWVVR
KLEALLPRVR DETLHRDLKA MLHSHRTNIA EAEDLLAASG YAP