Gene Swit_3152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3152 
Symbol 
ID5199746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3467615 
End bp3467986 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content73% 
IMG OID640582699 
Producthypothetical protein 
Protein accessionYP_001263638 
Protein GI148556056 
COG category[S] Function unknown 
COG ID[COG3189] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.919699 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGGCA GCGTCGGCAT CAAGCGTATC TACGAGCCGC CCGCCACGGC GGACGGGCGG 
CGGGTGCTGG TCGACCGCCT CTGGCCGCGC GGCGTCTCGC GCGAAGCGGC GGCGCTCGAC
CTGTGGCTGA AGGCGATCGC GCCGACCCCG GCGCTGCGCA CATGGTTCGG CCATGACCCG
GCGCGCTTCG CCACCTTCCG GGATCGCTAC CGCCGGGAGC TCGACGCCAA CCCCGACGCG
GTCGCCGAGC TGTGCGGCCT GATCGACCAG GGCGACGTCA CCCTGCTCTA CGCCGCGCAC
GACGAGCAGG CCAATCATGC GGTGGTGCTG GCCGGCTATC TCGGCGATCG GGGCTATGCC
GTGCGGCGAT GA
 
Protein sequence
MTGSVGIKRI YEPPATADGR RVLVDRLWPR GVSREAAALD LWLKAIAPTP ALRTWFGHDP 
ARFATFRDRY RRELDANPDA VAELCGLIDQ GDVTLLYAAH DEQANHAVVL AGYLGDRGYA
VRR