Gene Swit_3150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwit_3150 
Symbol 
ID5199744 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingomonas wittichii RW1 
KingdomBacteria 
Replicon accessionNC_009511 
Strand
Start bp3466307 
End bp3466810 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content71% 
IMG OID640582697 
Producthypothetical protein 
Protein accessionYP_001263636 
Protein GI148556054 
COG category[S] Function unknown 
COG ID[COG3743] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAACA CCACCCTCAT CATTGCCGCC ATCATCGCGA TCCTCGCGGT CGTCGGCCTG 
TTCCTGCTGC TGCGCAAGCC GACCCAGCGG GTCTCGCTGA GCGAGGCCGC GCCGCCCGTG
CCGGCGGCGA AGCCCGCGCC GGCCCCGGCG CCCGCGCCGA AACCGGTCGC CAAGGAAGGC
CATGGCATCA CCGACAGCGC CGCCGCCGCT GTCCTCGACG TGTCGGGATC GGTGCTCGGC
GTCGATGCCC ATCCCGACCT GCCGTCCGAC GACCTGACGC GGATCAAGGG GCTCGGCCCC
AAGGCGCGGA CGGTGCTTGC CGGACTCGGC GTCCATCGCT TCGACCAGCT CGCCGCGCTC
GATCCCGCCC AGGCGGCCGA GCTCGACGCC CGGCTGGGCG CCTTCAAGGG CCGCATCTTC
CGCGATCGCT GGATCGAGCA GGCCCGCTAT CTCGAGCAGG ACGACGTCGC CGGCTTCGAG
AAGGAATTCG GCAAGCTGGG GTGA
 
Protein sequence
MSNTTLIIAA IIAILAVVGL FLLLRKPTQR VSLSEAAPPV PAAKPAPAPA PAPKPVAKEG 
HGITDSAAAA VLDVSGSVLG VDAHPDLPSD DLTRIKGLGP KARTVLAGLG VHRFDQLAAL
DPAQAAELDA RLGAFKGRIF RDRWIEQARY LEQDDVAGFE KEFGKLG