| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3148 |
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| Symbol | xseA |
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| ID | 5199742 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3463496 |
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| End bp | 3464974 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640582695 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | YP_001263634 |
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| Protein GI | 148556052 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGAGT TTCTCCCCGA TGGGACCCAA GGTGACAGGC CCCGCCTGTT AGCCGAGGAG
CAGCCGGGCG ACAACGCGCC CGCGCTCTCC GTGTCCGAAT TGTCGGGCGC GCTGAAGCGC
CAGGTCGAGG AAGCGTTCGG CCATGTCCGG GTGCGCGGCG AGATTTCGGG GTTCAAGCGG
CACAGCTCGG GCCATTGCTA CCTGACCCTC AAGGACGACC GCGCGGCGAT CGACGGGGTG
ATCTGGAAGG GCCAGGCGGC GGCGATGCGC TTCCGGCCCG AGGACGGGAT CGAGGTGATC
GCGACCGGCA GGCTCACCAC CTATCCCGGC CGCTCCAAAT ATCAGATCGT GATCGAGCGC
ATGGAGCTGG CCGGGCAGGG CGCGCTGATG GCGCTGCTCG ACCAGCGCCG CCGCATGCTC
GCCGCCGAAG GGCTGTTCGA CGAGGATCGC AAGCGGCCGC TGCCGTTCAT GCCGCGCATC
ATCGGCGTCG TCACCTCGCC GACCGGCGCG GTGATCCGCG ACATCCTCCA CCGGCTCGAG
GACCGCTGCC CGACCCATGT CGTGCTGTGG CCAGTCGCGG TGCAGGGCGA GGGCGCCGCC
GCGCAGGTGG CGCGCGCCGT GCGCGGCTTC GGCGCGATGG CGCCGGGCGG GTCGGCGCCC
CGCCCCGACC TGCTGCCCGA TCTCCTGATC GTCGGGCGCG GCGGCGGATC GATCGAGGAC
CTCTGGGCAT TCAACGAGGA GGAGGTCGTC CGCGCGATCG CCGAATCGCC GATCCCGGTG
ATCTCCGCCG TGGGCCACGA GACCGACACG ACGCTGGCCG ACTTCGCCGC CGACCGGCGC
GCGCCGACCC CGACCGCGGC GGCCGAGATG GCGGTGCCGG TGCGCGCCGA CCTCGCCCAT
CATGTCCGCG AGCTGGGCGC CCGCGCCGAG CGGCTGGCGC GCCGCTATCG CGAGCGGGCA
GGCGAGCGGT TCGAGGCGGT GGCCGAGCGC TTCCCCGCGC TCGACAGCCT GTTCGCGGGC
CAGCAGCAGC GGCTCGACGA CGTCGCCGAC CGACTGCCCC GCGCGCTCGG CCAGCGCATC
GCGGTGGCGC GCGGCGACCT CGCCCATGCG GCGGGCGCGC TGCGGCCCTC GCTGCTCGAC
CGCAAGCTCG ACCGCGCCCG CGACCGGCTC GAGGCGGTCC GGCTGACCGA TCGCCCGATC
CGCGCGCGGA TCGCCGATGG CGAGATCGCG CTCGAACGGC TGTGGCGGAT CGCCGAGCAG
CTCCATCCCG ACAAGCCGCT GCAACGCGGC TATGTCCGCG TCGAGAAGCG CGGCGGCGGG
GTGCTGACCG AAGCGGCGGC GGCCCGCGCG GCGGGGCTGC TGACGCTGCA CTTCGCCGAC
GGCGCGGTCG ACGCGCGGGT CGAGAATGGC GGAAAGGCGC CGCCCGCGAA GCCCCGCAGC
GACGGCGAGG ACGCGCCCCG CCAGCAAAAT CTCTTTTAG
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| Protein sequence | MDEFLPDGTQ GDRPRLLAEE QPGDNAPALS VSELSGALKR QVEEAFGHVR VRGEISGFKR
HSSGHCYLTL KDDRAAIDGV IWKGQAAAMR FRPEDGIEVI ATGRLTTYPG RSKYQIVIER
MELAGQGALM ALLDQRRRML AAEGLFDEDR KRPLPFMPRI IGVVTSPTGA VIRDILHRLE
DRCPTHVVLW PVAVQGEGAA AQVARAVRGF GAMAPGGSAP RPDLLPDLLI VGRGGGSIED
LWAFNEEEVV RAIAESPIPV ISAVGHETDT TLADFAADRR APTPTAAAEM AVPVRADLAH
HVRELGARAE RLARRYRERA GERFEAVAER FPALDSLFAG QQQRLDDVAD RLPRALGQRI
AVARGDLAHA AGALRPSLLD RKLDRARDRL EAVRLTDRPI RARIADGEIA LERLWRIAEQ
LHPDKPLQRG YVRVEKRGGG VLTEAAAARA AGLLTLHFAD GAVDARVENG GKAPPAKPRS
DGEDAPRQQN LF
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