| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3141 |
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| Symbol | |
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| ID | 5199550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | - |
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| Start bp | 3453473 |
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| End bp | 3455350 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640582688 |
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| Product | sulfotransferase |
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| Protein accession | YP_001263627 |
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| Protein GI | 148556045 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.423755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTGC CGCCGCCGCA TCTTTCGCCG ATCTTCGCCC GCATCAAGAT CGGCGACCTG
CCCGGCGCCC GCGCCGCGGC CGAGCAGATA TTGCGCTCGC TGCCCGCCGA TCAGCCGCTG
CTGGCGCTCG CCGGCATGCT CGCCTGCCGG ACCGGCGACC TGCCCGGCGG CATCGCCCGG
CTGCGCGAGG CGCTGAAGCT CGCCCCCGGC GACCAGTCGA CCCGCAACAA CCTGGTCCGC
GCCCTGATCG AGACCGGCGC GCTCGACGAG GCGGCCGAGG CCTGCGCAGG GGGCGAGCGC
GATCCGAAGA TGCTGCGCCT GTCCGCCTAT ATCGAGCATC AGCGCGGCCA TCTCGACCGC
GCGGTCGCCG ACTATGAGGC GGTGGTCGCG GCGCTGCCCG ATGATTTCGA GAGCTGGAAC
AACCTCGGCA ACCTCTACGC CGCGACCGGC CATGGCGAGC GGGCCGAGGC GCCGCTGCGC
ACGGCGATCG CGCTCCGCCC CGACATCGCG CTGCCCTATC TCAACCTCGC CAAGCTGCTC
GCCGGGCTGC AGCGGCCCGA GGACGGCGCC GAACTGCTGC GCGCCGCCGC CGCCGCGATC
CCCGACAATG CCGAGATCCG CGCCGAACTG GGCCTGGCCG AAGCCGCGCT CGGCGCTTTC
GACGCGGCCG AGCGGGCCTA TCGCGCCGCG ATCGACCTCT CGCCGGGCTT CACCCCCGCC
TGGCTCGACC TCGCCATGCA GCTCGACAGC CTCAACAAGG TCGACGCGCT GGCGGCGCTG
TCCGACGCGG CCCGGACGAA GGGCATCGGC GCGGCCGAGG GAGCCGGCTT CATCGAGGCC
GCCGCGCTGC GCCGCCAGGG CGCCCATGCC GAGGCGCTCG CCGTCGCCCG CCAGGTTCCC
GCGACGATCA ATCCGGTCCG CCGCAACCAG CTGATCGGCG AGCTCGCCGA CCGGACCGGC
GACACCGACC TCGCCTTCGA GGCCTTTTCG GCGATGAACG CCGCCGCCCG CGCCCAGGCG
CATCCCGAGG CGCTCGGCCC CGCCTTCATC GACGAGATCG TCGGCAATGG CGAGCGGCTG
ACGCCGGCCC GGATCGCCGC GTGGAGCAAG GTGGAGATCG ATCCCGCCCC ACCCGCGCCG
ATCTTCCTGG TCGGCTTCCC GCGCTCGGGG ACGACGCTGC TCGACACGCT GCTGATGAAC
ATCCCCTCGC TCCATGTGCT CGAGGAACTG CCCATCGTCC GCACGGTGCA GCGCGCGATG
GGCGATCCCG ATCGGCTGGA CAGCCTGACC GATGCCGAGG CCAATGCGCT GCGCCGCACC
TATTTCGAGA CGCTCGACGG CCTCGCGCCG CCCGCGCCGG GGCAGCGGAT CGTCGACAAA
TTCCCGCTGC ATATGGCGCG GATGGCCATG ATCCACCGGC TGTTCCCCGA CGCCAAGGTG
ATCTTCGTCG AACGGCATCC GTGCGATTGC GTGCTGAGCG GGTTCATGTC GAGCTTCGAG
CTCAACCCCG CGATGCTGAG CTTCACCTCG CTGGAGGGCG CCGCGAGGCT CTACGACGCG
GCCGCGACCG CCTGGACGCG GGCCGAGGCG CTGTTGCCGA TCGACGTCTG CCGGATTCGC
TACGAGACGA TGATCGAGGA TCTGGAAGGG GAGATGCGCC GGCTGCTCGA CTTCCTCGGC
ATCGCCTGGG ACGACGCCGT GCTCGACAAT CGCGGCAGCG CGGCCCGGCG CGAGCATATC
CGCACCGCCA GCTACGCGCA GGTCACAGAG CCGATCTACA ACCGCGCGAT CGGCCGCTGG
GAACGCTATC GGTCGCGGAT GGCCGACATC CTGCCGACCC TCGCCCCGTG GGCCGAGAGG
ATGGGCTATC GGGTCTGA
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| Protein sequence | MTLPPPHLSP IFARIKIGDL PGARAAAEQI LRSLPADQPL LALAGMLACR TGDLPGGIAR
LREALKLAPG DQSTRNNLVR ALIETGALDE AAEACAGGER DPKMLRLSAY IEHQRGHLDR
AVADYEAVVA ALPDDFESWN NLGNLYAATG HGERAEAPLR TAIALRPDIA LPYLNLAKLL
AGLQRPEDGA ELLRAAAAAI PDNAEIRAEL GLAEAALGAF DAAERAYRAA IDLSPGFTPA
WLDLAMQLDS LNKVDALAAL SDAARTKGIG AAEGAGFIEA AALRRQGAHA EALAVARQVP
ATINPVRRNQ LIGELADRTG DTDLAFEAFS AMNAAARAQA HPEALGPAFI DEIVGNGERL
TPARIAAWSK VEIDPAPPAP IFLVGFPRSG TTLLDTLLMN IPSLHVLEEL PIVRTVQRAM
GDPDRLDSLT DAEANALRRT YFETLDGLAP PAPGQRIVDK FPLHMARMAM IHRLFPDAKV
IFVERHPCDC VLSGFMSSFE LNPAMLSFTS LEGAARLYDA AATAWTRAEA LLPIDVCRIR
YETMIEDLEG EMRRLLDFLG IAWDDAVLDN RGSAARREHI RTASYAQVTE PIYNRAIGRW
ERYRSRMADI LPTLAPWAER MGYRV
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