Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swit_3133 |
Symbol | gpmA |
ID | 5199055 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingomonas wittichii RW1 |
Kingdom | Bacteria |
Replicon accession | NC_009511 |
Strand | - |
Start bp | 3445452 |
End bp | 3446138 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640582680 |
Product | phosphoglyceromutase |
Protein accession | YP_001263619 |
Protein GI | 148556037 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0588] Phosphoglycerate mutase 1 |
TIGRFAM ID | [TIGR01258] phosphoglycerate mutase, BPG-dependent, family 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.121125 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.825822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACGC TCGTCCTGAT CCGCCATGGC CAGTCCGCCT GGAATCTGGA AAACCGCTTC ACCGGCTGGT GGGATGTCAA CCTGACCGAC CAGGGCATCG CCGAGGCGAA GGCGGCCGGC GAGCTGATGG CCGCCAAGGG CCTCGACTTC GACCAGTGCT ACACCAGCTT CCAGACCCGC GCGATCAAGA CGCTCAACAT CGCACTGGAG GCGATGGGCC GGCTGTGGCT GCCGGTCGAG AAGGACTGGC GCCTCAACGA GCGGCACTAT GGCGGGCTGA CCGGGCTCAA CAAGGCCGAG ACCGCGGCCA GGCATGGCGA CGCGCAGGTC AAGGTGTGGC GCCGCAGCTT CGACATCCCG CCGCCGGTGC TCGAACCGGG CGGCGAGTTC GACCTGTCGA AGGACCGCCG CTACGCCGGC ATCGCGATCC CCAGCACCGA GAGCCTGAAG GACACGATCG CGCGCGTCCT GCCCTATTGG GAGGAGCGGA TCGCGCCCGA CCTGAAGGCG GGCAAGCGGG TGGTGATCTC CGCGCACGGC AATTCGCTGC GCGCGCTGGT CAAGCATCTG TCGCACATTC CCGACGACGA GATCACCGAG CTGGAGATTC CGACCGGCCA GCCGATCGTC TACGAGCTGG CCGACGACCT GACGGCGCGG GACCGCTATT ATCTGTCGGA GCGCTGA
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Protein sequence | MPTLVLIRHG QSAWNLENRF TGWWDVNLTD QGIAEAKAAG ELMAAKGLDF DQCYTSFQTR AIKTLNIALE AMGRLWLPVE KDWRLNERHY GGLTGLNKAE TAARHGDAQV KVWRRSFDIP PPVLEPGGEF DLSKDRRYAG IAIPSTESLK DTIARVLPYW EERIAPDLKA GKRVVISAHG NSLRALVKHL SHIPDDEITE LEIPTGQPIV YELADDLTAR DRYYLSER
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