| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swit_3129 |
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| Symbol | |
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| ID | 5198230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingomonas wittichii RW1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009511 |
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| Strand | + |
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| Start bp | 3440398 |
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| End bp | 3443301 |
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| Gene Length | 2904 bp |
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| Protein Length | 967 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640582677 |
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| Product | peptidase M16 domain-containing protein |
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| Protein accession | YP_001263616 |
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| Protein GI | 148556034 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.586411 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGCA GCCTGTTCCG TCCCGCCGCC GCCCTGCTGT TCGCAACCGC GCTCTCCGTC
CCTTCGATCG CTCCCCTGAC CGCCGCCGCC GTCGCCGCCG AGCCGGCCTC GGTCGCGACG
CTCGTGAAGG CGGTCGACAT CCCCTATCAG GCGTTCACGC TCGACAACGG CCTGCGCGTG
ATCGTCCATA CCGACCGCAA GGCGCCCGTC GTCGCGGTCT CGGTCTGGTA TCATATCGGG
TCGAAGGACG AGCCCGCGGG CAAGACCGGC TTCGCCCATC TGTTCGAGCA TCTGATGTTC
AACGGGTCGG AGAACGCCAA TGAGGATTTC TTCAAGCCGC TCGAATCGAT CGGCGCGACC
GACCTCAACG GCACCACCTG GTTCGACCGC ACCAATTATT TCGAGACGGT GCCGACCGGC
GCGCTCGATC TCGCGCTGTT CCTCGAATCC GACCGGATGG GCCATCTGCT CGGCGCGATC
GACAAGGCCA AGCTCGATAA CCAGCGCGGC GTCGTCCAGA ACGAGAAGCG CCAGGGCGAC
AACGAGCCCT ATGGCCTGGT CGAATATGCC CAGCTCGCCG CGCTGTTTCC CGAGGGGCAC
CCCTATCGCC ACTCGACGAT CGGCTCGATG GCCGACCTCG ACGCCGCCAG CCTCGACGAC
GTGAAGAACT GGTTCCGCGC CCATTACGGC CCGAACAACG CGGTGCTGGT GCTGGCGGGC
GACATCGACG CCGCGACCGC GAAGGCCAAG GTCCAGAAAT GGTTCGGCGA CATCCCGCGC
GGGCCGGAGA CGGCGCGCCC CGACGTGCCG GTGCCGACGC TGGGGGCGCC GGTCGACCAG
GTGATGAAGG ACCGGGTCGC GCAGACCCGC ATCTACCGCA ACTGGGTGGT GCCGGGGGTC
AACGATCCCG ACCTGATCCC GCTCGACCTC GGCATGGACG TGCTCGGCGG GCTCGCCTCG
TCGCGGCTCG ACAATGCGAT GGTGCGCAAG GCCAAGACCG CGGTCTCGGT GACCGCCAGC
GTCCAGCCGT TCGAGAAGAT CTCGATCGTC GAGGTGACCG CCGACGTGAA GCCCGGCGTC
GATCCCAAGC TGGTCGCCAG GCAGCTCGAC GACCTCATCG CCGAATTCGT CCGCAACGGC
CCGACCGCCG ACGAGGTGAA GCGCGCCGCG ACCAAGCAGG CGGCGGGCGA GATCGCTGGG
CTGGAGACGG TCGGCGGCTT CGCCGGCAAG GCGGTGACGC TGGCCGAGGG CGCAGTCTAT
TCGAACGATC CCGACAAGTA CAAGAAGGAC CTCGCCGCCA CCGCGGCCGC GACCCCGGCG
AGCATCAGGG CCGCGTTGCA GAAATGGCTC GGCCGGCCCG CCTATCGGCT GATGGTCGAG
CCGGGCGAGC GGACCGCGTC CGACATGGCG GCGGCCGGCG GCAGCGCGGT CGGCGCGCCG
GGCGGCGGCA TGGCCCCGCG CTACTATCGC GATCCGAAGT TCGAGGGCGG GGCCGCGGCG
CCCGCCATCT CGCAGACGCT GAAGCCGACC GCCGCGGTCG ACCGCTCCTC GCCGCCGCCG
GTCGAGGAGA TCAAGGACCT GACCTTCCCC GACGTCGAGC GGACCACCCT GTCGAACGGC
ATCAAGGTGG TGTTCGCGCG GCGCACGACG GTGCCGACGG TGCGCGTCTC GGTCGCGTTC
GACGCGGGCA ATGCCGCCGA TCCCAAGGCC AAGCTCGGCA CCCAGGGGCT GATGCTGTCG
CTGCTCGACG AGGGCGCCGG CAAGCTCGAT TCGATCGGCA TCGCCGAGGC GCAGGAGCGG
CTGGGCGCGC AGATCGCCTC GTCGGCGACG ATGGACCGCA CCAGCGTCTC GATGTTCGCG
CTCAAGGCCA ATCTCGCGCC GTCGCTCGAC CTGCTCGCCG ACATCGTCGA GCGGCCGACC
TTCGCGCCGG CCGAGATCGA GCGGCTGCGC GGCCAGATCC TCGCCGGCAT CGCCGCGGAG
AATTCGCAGC CGCGCGGCAT CGCCCGCCGG GTGCTGCCGA CGCTGCTCTA CGGCAATCTC
CACCCCTATG GCGTGCCGCT GTCGGGCAGC GGCACCGCCG AGGGCGTGAA GGCCGTCACC
CGCGCCGACC TGGTCGCCTT CCACCAGGCG TGGATCCGGC CCGACAACGC CAGGATCTTC
GTCACCGGCG ACACCACGCT CGACGAATTG AAGCCGCTGC TCGAGGCGCG CTTCGGCACC
TGGGCCAAGC CGGCCGTGGC GAAGGGCGAG AAGCTGTTCC GCATGGACCG CATGGCGCGT
CCGGCGCGCA TCGTCCTGAT CGACCGGCCG CAGAGCCCGC AGAGCTACAT CATGGCCGGG
CAGCTCCTGC CGACCAAGGG CGTCGACGAT CCGCTGGCGC TGATCGCGGC GAACGAGGTG
ATCGGCGGCA GCTTCCTGTC GCGGCTCAAC ATGGATCTGC GCGAGAGCAA GGGCTGGGCC
TATGGCGCGT TCAGCCAGGC GGCGACCCTG CGCGAGACCA TGCCGCTCTA CGTCATCGCC
CCGGTCCAGA CCGACCGGAC CGGCGATTCG ATCAAAGCGG CGCTGGCCGA CATGAAGGAG
TTCCTGACCA CCAAGGGCGT CGACGCCGAG GAGCGCGAGC GCACCATCAA CGGCCAGATC
CGCTCGCTGC CGGGATCGTT CGAGACGTCG AGCGACCTGC TCGGCGCGCT CGTCCAGATG
GACACGCTGC AGCGGCCCGA CGATTATTAC GAGAAGCTGC CCGGCCGTTT CCGCGCGCTG
ACCGCCGCCC AGATGGACGA GGCCGCCCGC GCCGCGATCC GCCCCGACAG CCTGATCTGG
GTCGTCGTCG GCGACGCCGC CAAGGTCGAG CCGCAGCTCA AGGAGATCGG CCTGCCGGTC
GAGCGCATGG TCGTCGGCCA GTGA
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| Protein sequence | MRRSLFRPAA ALLFATALSV PSIAPLTAAA VAAEPASVAT LVKAVDIPYQ AFTLDNGLRV
IVHTDRKAPV VAVSVWYHIG SKDEPAGKTG FAHLFEHLMF NGSENANEDF FKPLESIGAT
DLNGTTWFDR TNYFETVPTG ALDLALFLES DRMGHLLGAI DKAKLDNQRG VVQNEKRQGD
NEPYGLVEYA QLAALFPEGH PYRHSTIGSM ADLDAASLDD VKNWFRAHYG PNNAVLVLAG
DIDAATAKAK VQKWFGDIPR GPETARPDVP VPTLGAPVDQ VMKDRVAQTR IYRNWVVPGV
NDPDLIPLDL GMDVLGGLAS SRLDNAMVRK AKTAVSVTAS VQPFEKISIV EVTADVKPGV
DPKLVARQLD DLIAEFVRNG PTADEVKRAA TKQAAGEIAG LETVGGFAGK AVTLAEGAVY
SNDPDKYKKD LAATAAATPA SIRAALQKWL GRPAYRLMVE PGERTASDMA AAGGSAVGAP
GGGMAPRYYR DPKFEGGAAA PAISQTLKPT AAVDRSSPPP VEEIKDLTFP DVERTTLSNG
IKVVFARRTT VPTVRVSVAF DAGNAADPKA KLGTQGLMLS LLDEGAGKLD SIGIAEAQER
LGAQIASSAT MDRTSVSMFA LKANLAPSLD LLADIVERPT FAPAEIERLR GQILAGIAAE
NSQPRGIARR VLPTLLYGNL HPYGVPLSGS GTAEGVKAVT RADLVAFHQA WIRPDNARIF
VTGDTTLDEL KPLLEARFGT WAKPAVAKGE KLFRMDRMAR PARIVLIDRP QSPQSYIMAG
QLLPTKGVDD PLALIAANEV IGGSFLSRLN MDLRESKGWA YGAFSQAATL RETMPLYVIA
PVQTDRTGDS IKAALADMKE FLTTKGVDAE ERERTINGQI RSLPGSFETS SDLLGALVQM
DTLQRPDDYY EKLPGRFRAL TAAQMDEAAR AAIRPDSLIW VVVGDAAKVE PQLKEIGLPV
ERMVVGQ
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